Literature DB >> 21184213

A new long terminal repeat (LTR) sequence allows to identify J genome from J S and St genomes of Thinopyrum intermedium.

Z X Tang1, Z J Yang, S L Fu, M Y Yang, G R Li, H Q Zhang, F Q Tan, Zhenglong Ren.   

Abstract

A repetitive sequence of 491 bp, named pMD232-500, was isolated from S. cereale cv. Kustro using wheat SSR marker Xgwm232. GenBank BLAST search revealed that the sequence of pMD232-500 was highly similar to a part of retrotransposon Nusif-1. Fluorescence in situ hybridization (FISH) analysis using pMD232-500 as probe indicated that only 14 Thinopyrum intermedium chromosomes and all the chromosomes of S. cereale cv. Kustro bear FISH signals, however, no FISH signals were observed on Dasypyrum villosum chromosomes. In addition, the FISH signals were distributed on whole arms except their terminal regions. Further genomic in situ hybridization (GISH) analysis using genomic DNA from Pseudoroegneria spicata indicated that the 14 Th. intermedium chromosomes bearing FISH signals should belong to J genome. Thereafter, the repetitive elements pMD232-500 showed the unambiguous features of genomic constitution of Th. intermedium. In addition, the results in the present study have indicated the similarity of genomes from Th. intermedium and S. cereale.

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Year:  2010        PMID: 21184213     DOI: 10.1007/s13353-010-0019-8

Source DB:  PubMed          Journal:  J Appl Genet        ISSN: 1234-1983            Impact factor:   3.240


  7 in total

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Authors:  Q Chen
Journal:  Cytogenet Genome Res       Date:  2005       Impact factor: 1.636

2.  Molecular cytogenetic discrimination and reaction to wheat streak mosaic virus and the wheat curl mite in Zhong series of wheat--Thinopyrum intermedium partial amphiploids.

Authors:  Qin Chen; R L Conner; H J Li; S C Sun; F Ahmad; A Laroche; R J Graf
Journal:  Genome       Date:  2003-02       Impact factor: 2.166

3.  Genome analysis of Thinopyrum intermedium and Thinopyrum ponticum using genomic in situ hybridization.

Authors:  Q Chen; R L Conner; A Laroche; J B Thomas
Journal:  Genome       Date:  1998-08       Impact factor: 2.166

4.  A microsatellite map of wheat.

Authors:  M S Röder; V Korzun; K Wendehake; J Plaschke; M H Tixier; P Leroy; M W Ganal
Journal:  Genetics       Date:  1998-08       Impact factor: 4.562

5.  Disomic Thinopyrum intermedium addition lines in wheat with barley yellow dwarf virus resistance and with rust resistances.

Authors:  P J Larkin; P M Banks; E S Lagudah; R Appels; C Xiao; X Zhiyong; H W Ohm; R A McIntosh
Journal:  Genome       Date:  1995-04       Impact factor: 2.166

6.  Variations of tandem repeat, regulatory element, and promoter regions revealed by wheat-rye amphiploids.

Authors:  Zong-Xiang Tang; Shu-Lan Fu; Zheng-Long Ren; Jian-Ping Zhou; Ben-Ju Yan; Huai-Qiong Zhang
Journal:  Genome       Date:  2008-06       Impact factor: 2.166

7.  Characterization and chromosomal location of Pm40 in common wheat: a new gene for resistance to powdery mildew derived from Elytrigia intermedium.

Authors:  P G Luo; H Y Luo; Z J Chang; H Y Zhang; M Zhang; Z L Ren
Journal:  Theor Appl Genet       Date:  2009-02-05       Impact factor: 5.699

  7 in total
  5 in total

1.  Chromosomal distribution of a new centromeric Ty3-gypsy retrotransposon sequence in Dasypyrum and related Triticeae species.

Authors:  Guang-Rong Li; Cheng Liu; Pei Wei; Xiao-Jin Song; Zu-Jun Yang
Journal:  J Genet       Date:  2012       Impact factor: 1.166

2.  New molecular markers and cytogenetic probes enable chromosome identification of wheat-Thinopyrum intermedium introgression lines for improving protein and gluten contents.

Authors:  Guangrong Li; Hongjin Wang; Tao Lang; Jianbo Li; Shixiao La; Ennian Yang; Zujun Yang
Journal:  Planta       Date:  2016-06-11       Impact factor: 4.116

3.  Introduction of Thinopyrum intermedium ssp. trichophorum chromosomes to wheat by trigeneric hybridization involving Triticum, Secale and Thinopyrum genera.

Authors:  Jianbo Li; Tao Lang; Bin Li; Zhihui Yu; Hongjin Wang; Guangrong Li; Ennian Yang; Zujun Yang
Journal:  Planta       Date:  2017-03-03       Impact factor: 4.116

4.  Simultaneous visualization of different genomes (J, JSt and St) in a Thinopyrum intermedium × Thinopyrum ponticum synthetic hybrid (Poaceae) and in its parental species by multicolour genomic in situ hybridization (mcGISH).

Authors:  Klaudia Kruppa; Márta Molnár-Láng
Journal:  Comp Cytogenet       Date:  2016-06-17       Impact factor: 1.800

5.  Copy Number Variation of Transposable Elements in Thinopyrum intermedium and Its Diploid Relative Species.

Authors:  Mikhail G Divashuk; Gennady I Karlov; Pavel Yu Kroupin
Journal:  Plants (Basel)       Date:  2019-12-21
  5 in total

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