Literature DB >> 21181539

Transposable elements as catalysts for chromosome rearrangements.

Jianbo Zhang1, Chuanhe Yu, Lakshminarasimhan Krishnaswamy, Thomas Peterson.   

Abstract

Barbara McClintock first showed that transposable elements in maize can induce major chromosomal rearrangements, including duplications, deletions, inversions, and translocations. More recently, researchers have made significant progress in elucidating the mechanisms by which transposons can induce genome rearrangements. For the Ac/Ds transposable element system, rearrangements are generated when the termini of different elements are used as substrates for transposition. The resulting alternative transposition reaction directly generates a variety of rearrangements. The size and type of rearrangements produced depend on the location and orientation of transposon insertion. A single locus containing a pair of alternative transposition-competent elements can produce a virtually unlimited number of genome rearrangements. With a basic understanding of the mechanisms involved, researchers are beginning to utilize both naturally occurring and in vitro-generated configurations of transposable elements in order to manipulate chromosome structure.

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Year:  2011        PMID: 21181539     DOI: 10.1007/978-1-61737-957-4_18

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  16 in total

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Journal:  Interface Focus       Date:  2017-08-18       Impact factor: 3.906

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Authors:  Ana E Gasparotto; Diogo Milani; Emiliano Martí; Ana Beatriz S M Ferretti; Vanessa B Bardella; Frederico Hickmann; Magda Zrzavá; František Marec; Diogo C Cabral-de-Mello
Journal:  Chromosoma       Date:  2022-10-11       Impact factor: 2.919

3.  Transposon-induced inversions activate gene expression in the maize pericarp.

Authors:  Sharu Paul Sharma; Tao Zuo; Thomas Peterson
Journal:  Genetics       Date:  2021-06-24       Impact factor: 4.562

4.  Building the sugarcane genome for biotechnology and identifying evolutionary trends.

Authors:  Nathalia de Setta; Cláudia Barros Monteiro-Vitorello; Cushla Jane Metcalfe; Guilherme Marcelo Queiroga Cruz; Luiz Eduardo Del Bem; Renato Vicentini; Fábio Tebaldi Silveira Nogueira; Roberta Alvares Campos; Sideny Lima Nunes; Paula Cristina Gasperazzo Turrini; Andreia Prata Vieira; Edgar Andrés Ochoa Cruz; Tatiana Caroline Silveira Corrêa; Carlos Takeshi Hotta; Alessandro de Mello Varani; Sonia Vautrin; Adilson Silva da Trindade; Mariane de Mendonça Vilela; Carolina Gimiliani Lembke; Paloma Mieko Sato; Rodrigo Fandino de Andrade; Milton Yutaka Nishiyama; Claudio Benicio Cardoso-Silva; Katia Castanho Scortecci; Antônio Augusto Franco Garcia; Monalisa Sampaio Carneiro; Changsoo Kim; Andrew H Paterson; Hélène Bergès; Angélique D'Hont; Anete Pereira de Souza; Glaucia Mendes Souza; Michel Vincentz; João Paulo Kitajima; Marie-Anne Van Sluys
Journal:  BMC Genomics       Date:  2014-06-30       Impact factor: 3.969

Review 5.  Nothing in Evolution Makes Sense Except in the Light of Genomics: Read-Write Genome Evolution as an Active Biological Process.

Authors:  James A Shapiro
Journal:  Biology (Basel)       Date:  2016-06-08

6.  EpiTEome: Simultaneous detection of transposable element insertion sites and their DNA methylation levels.

Authors:  Josquin Daron; R Keith Slotkin
Journal:  Genome Biol       Date:  2017-05-12       Impact factor: 13.583

7.  Meiosis Leads to Pervasive Copy-Number Variation and Distorted Inheritance of Accessory Chromosomes of the Wheat Pathogen Zymoseptoria tritici.

Authors:  Simone Fouché; Clémence Plissonneau; Bruce A McDonald; Daniel Croll
Journal:  Genome Biol Evol       Date:  2018-06-01       Impact factor: 3.416

Review 8.  Advances in Cereal Crop Genomics for Resilience under Climate Change.

Authors:  Tinashe Zenda; Songtao Liu; Anyi Dong; Huijun Duan
Journal:  Life (Basel)       Date:  2021-05-29

9.  Rapid Increase in Genome Size as a Consequence of Transposable Element Hyperactivity in Wood-White (Leptidea) Butterflies.

Authors:  Venkat Talla; Alexander Suh; Faheema Kalsoom; Vlad Dinca; Roger Vila; Magne Friberg; Christer Wiklund; Niclas Backström
Journal:  Genome Biol Evol       Date:  2017-10-01       Impact factor: 3.416

10.  Genome-wide analysis of short interspersed nuclear elements provides insight into gene and genome evolution in citrus.

Authors:  Haijun Meng; Jiancan Feng; Tuanhui Bai; Zaihai Jian; Yanhui Chen; Guoliang Wu
Journal:  DNA Res       Date:  2020-02-01       Impact factor: 4.477

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