Literature DB >> 21175647

Real-time polymerase chain reaction detection of parvovirus B19 DNA in blood donations using a commercial and an in-house assay.

M H G M Koppelman1, P van Swieten, H T M Cuijpers.   

Abstract

BACKGROUND: European regulations require testing of manufacturing plasma for parvovirus B19 (B19) DNA to limit the load of this virus to a maximum acceptable level of 10 IU/µL. To meet this requirement, most manufacturers introduced a test algorithm to identify and eliminate high-load donations before making large manufacturing pools of plasma units. Sanquin screens all donations using a commercial assay from Roche and an in-house assay. STUDY DESIGN AND METHODS: Between 2006 and 2009, 6.2 million donations were screened using two different polymerase chain reaction (PCR) assays targeting B19 DNA. Donations with B19 DNA loads of greater than 1 × 10(6) IU/mL showing significant differences in viral load between the two assays were further analyzed by sequencing analysis.
RESULTS: A total of 396 donations with B19 DNA loads of greater than 1 × 10(6) IU/mL were identified. Fifteen samples (3.8%) had discordant test results; 10 samples (2.5%) were underquantified by the Roche assay, two samples (0.5%) were underquantified by the in-house assay, and three samples (0.8%) were not detected by the Roche assay. Sequencing analysis revealed mismatches in primer and probe-binding regions. Phylogenetic analysis showed that 12 samples were B19 Genotype 1. The three samples not detected by the Roche assay were B19 Genotype 2.
CONCLUSION: This study shows that 3.8% of the viremic B19 DNA-positive donations are not quantified correctly by the Roche or in-house B19 DNA assays. B19 Genotype 1 isolates showing incorrect test results are more common than B19 Genotype 2 or 3 isolates. Newly designed B19 PCR assays for blood screening should preferably have multiplexed formats targeting multiple regions of the B19 genome.
© 2010 American Association of Blood Banks.

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Year:  2010        PMID: 21175647     DOI: 10.1111/j.1537-2995.2010.02995.x

Source DB:  PubMed          Journal:  Transfusion        ISSN: 0041-1132            Impact factor:   3.157


  4 in total

1.  Characterization of Markers of the Progression of Human Parvovirus B19 Infection in Virus DNA-Positive Plasma Samples.

Authors:  Xavier Bonjoch; Francesc Obispo; Cristina Alemany; Ana Pacha; Esteban Rodríguez; Dolors Xairó
Journal:  Transfus Med Hemother       Date:  2015-04-23       Impact factor: 3.747

2.  Transplant Virus Detection Using Multiplex Targeted Sequencing.

Authors:  Susanna K Tan; Peidong Shen; Martina I Lefterova; Malaya K Sahoo; Eula Fung; Justin I Odegaard; Ronald W Davis; Benjamin A Pinsky; Curt Scharfe
Journal:  J Appl Lab Med       Date:  2018-03

3.  Development of a nanoparticle-assisted PCR (nanoPCR) assay for detection of mink enteritis virus (MEV) and genetic characterization of the NS1 gene in four Chinese MEV strains.

Authors:  Jianke Wang; Yuening Cheng; Miao Zhang; Hang Zhao; Peng Lin; Li Yi; Mingwei Tong; Shipeng Cheng
Journal:  BMC Vet Res       Date:  2015-01-13       Impact factor: 2.741

4.  Global co-existence of two evolutionary lineages of parvovirus B19 1a, different in genome-wide synonymous positions.

Authors:  Marijke W A Molenaar-de Backer; Vladimir V Lukashov; Rob S van Binnendijk; Hein J Boot; Hans L Zaaijer
Journal:  PLoS One       Date:  2012-08-13       Impact factor: 3.240

  4 in total

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