Literature DB >> 21175009

Data warehousing methods and processing infrastructure for brain recovery research.

T Gee1, S Kenny, C J Price, M L Seghier, S L Small, A P Leff, A Pacurar, S C Strother.   

Abstract

In order to accelerate translational neuroscience with the goal of improving clinical care it has become important to support rapid accumulation and analysis of large, heterogeneous neuroimaging samples and their metadata from both normal control and patient groups. We propose a multi-centre, multinational approach to accelerate the data mining of large samples and facilitate data-led clinical translation of neuroimaging results in stroke. Such data-driven approaches are likely to have an early impact on clinically relevant brain recovery while we simultaneously pursue the much more challenging model-based approaches that depend on a deep understanding of the complex neural circuitry and physiological processes that support brain function and recovery. We present a brief overview of three (potentially converging) approaches to neuroimaging data warehousing and processing that aim to support these diverse methods for facilitating prediction of cognitive and behavioral recovery after stroke, or other types of brain injury or disease.

Entities:  

Mesh:

Year:  2010        PMID: 21175009

Source DB:  PubMed          Journal:  Arch Ital Biol        ISSN: 0003-9829            Impact factor:   1.000


  6 in total

1.  The Canadian Biomarker Integration Network in Depression (CAN-BIND): magnetic resonance imaging protocols

Authors:  Glenda M. MacQueen; Stefanie Hassel; Stephen R. Arnott; Addington Jean; Christopher R. Bowie; Signe L. Bray; Andrew D. Davis; Jonathan Downar; Jane A. Foster; Benicio N. Frey; Benjamin I. Goldstein; Geoffrey B. Hall; Kate L. Harkness; Jacqueline Harris; Raymond W. Lam; Catherine Lebel; Roumen Milev; Daniel J. Müller; Sagar V. Parikh; Sakina Rizvi; Susan Rotzinger; Gulshan B. Sharma; Claudio N. Soares; Gustavo Turecki; Fidel Vila-Rodriguez; Joanna Yu; Mojdeh Zamyadi; Stephen C. Strother; Sidney H. Kennedy
Journal:  J Psychiatry Neurosci       Date:  2019-07-01       Impact factor: 6.186

2.  The PLORAS Database: A data repository for Predicting Language Outcome and Recovery After Stroke.

Authors:  Mohamed L Seghier; Elnas Patel; Susan Prejawa; Sue Ramsden; Andre Selmer; Louise Lim; Rachel Browne; Johanna Rae; Zula Haigh; Deborah Ezekiel; Thomas M H Hope; Alex P Leff; Cathy J Price
Journal:  Neuroimage       Date:  2015-04-14       Impact factor: 6.556

3.  Discovering biomarkers for antidepressant response: protocol from the Canadian biomarker integration network in depression (CAN-BIND) and clinical characteristics of the first patient cohort.

Authors:  Raymond W Lam; Roumen Milev; Susan Rotzinger; Ana C Andreazza; Pierre Blier; Colleen Brenner; Zafiris J Daskalakis; Moyez Dharsee; Jonathan Downar; Kenneth R Evans; Faranak Farzan; Jane A Foster; Benicio N Frey; Joseph Geraci; Peter Giacobbe; Harriet E Feilotter; Geoffrey B Hall; Kate L Harkness; Stefanie Hassel; Zahinoor Ismail; Francesco Leri; Mario Liotti; Glenda M MacQueen; Mary Pat McAndrews; Luciano Minuzzi; Daniel J Müller; Sagar V Parikh; Franca M Placenza; Lena C Quilty; Arun V Ravindran; Tim V Salomons; Claudio N Soares; Stephen C Strother; Gustavo Turecki; Anthony L Vaccarino; Fidel Vila-Rodriguez; Sidney H Kennedy
Journal:  BMC Psychiatry       Date:  2016-04-16       Impact factor: 3.630

4.  Brain-CODE: A Secure Neuroinformatics Platform for Management, Federation, Sharing and Analysis of Multi-Dimensional Neuroscience Data.

Authors:  Anthony L Vaccarino; Moyez Dharsee; Stephen Strother; Don Aldridge; Stephen R Arnott; Brendan Behan; Costas Dafnas; Fan Dong; Kenneth Edgecombe; Rachad El-Badrawi; Khaled El-Emam; Tom Gee; Susan G Evans; Mojib Javadi; Francis Jeanson; Shannon Lefaivre; Kristen Lutz; F Chris MacPhee; Jordan Mikkelsen; Tom Mikkelsen; Nicholas Mirotchnick; Tanya Schmah; Christa M Studzinski; Donald T Stuss; Elizabeth Theriault; Kenneth R Evans
Journal:  Front Neuroinform       Date:  2018-05-23       Impact factor: 4.081

5.  Management and Quality Control of Large Neuroimaging Datasets: Developments From the Barcelonaβeta Brain Research Center.

Authors:  Jordi Huguet; Carles Falcon; David Fusté; Sergi Girona; David Vicente; José Luis Molinuevo; Juan Domingo Gispert; Grégory Operto
Journal:  Front Neurosci       Date:  2021-04-15       Impact factor: 4.677

6.  A randomized, crossover comparison of ketamine and electroconvulsive therapy for treatment of major depressive episodes: a Canadian biomarker integration network in depression (CAN-BIND) study protocol.

Authors:  Jennifer L Phillips; Natalia Jaworska; Elizabeth Kamler; Venkat Bhat; Jean Blier; Jane A Foster; Stefanie Hassel; Keith Ho; Lisa McMurray; Roumen Milev; Zahra Moazamigoudarzi; Franca M Placenza; Stéphane Richard-Devantoy; Susan Rotzinger; Gustavo Turecki; Gustavo H Vazquez; Sidney H Kennedy; Pierre Blier
Journal:  BMC Psychiatry       Date:  2020-06-02       Impact factor: 3.630

  6 in total

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