Literature DB >> 21174438

Local and bulk hydration of zwitterionic glycine and its analogues through molecular simulations.

Andrew White1, Shaoyi Jiang.   

Abstract

Molecular dynamics simulations were used to characterize the differences in hydration between glycine and two of its zwitterionic analogues: N,N-dimethylglycine and N,N,N-trimethylglycine (glycine betaine). The hydration of dodecane and oligo(ethylene glycol) was studied for reference. Both structuring and dynamics of bulk and bound water were examined using a variety of properties and at multiple concentrations. Metrics, such as radial distribution functions and residence times, were used to characterize hydration. Also, we used more specialized metrics that can discriminate between subtle differences in hydration, such as condensed phase order parameters, Voronoi tessellations, and multidimensional pair-pair correlation functions. Trimethylglycine was found to have a unique hydration shell that extends across the entire molecule and has no specific interactions between solute molecules. Also, we found that dimethylglycine has a similar hydration structure to that of trimethylglycine despite its hydrogen-bond donor. Glycine was found to aggregate and have a more disjoint hydration shell. All three zwitterions were found to structurally affect water within 1.5-2.0 coordination shells. Lastly, trimethylglycine is disperse in solution even at very high concentrations, and water rapidly moves between trimethylglycine amine groups. This work has meaningful implications for protein stability where trimethylglycine is known to prevent protein aggregation and nonfouling interfaces where trimethylglycine prevents nonspecific protein adsorption.

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Year:  2010        PMID: 21174438     DOI: 10.1021/jp1067654

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  12 in total

1.  Universal surface-initiated polymerization of antifouling zwitterionic brushes using a mussel-mimetic peptide initiator.

Authors:  Jinghao Kuang; Phillip B Messersmith
Journal:  Langmuir       Date:  2012-04-23       Impact factor: 3.882

2.  4-Oxoproline as a Site-Specific Infrared Probe: Application To Assess Proline Isomerization and Dimer Formation.

Authors:  Rachel M Abaskharon; Debopreeti Mukherjee; Feng Gai
Journal:  J Phys Chem B       Date:  2019-06-10       Impact factor: 2.991

3.  Hydration and vibrational dynamics of betaine (N,N,N-trimethylglycine).

Authors:  Tanping Li; Yaowen Cui; John Mathaga; Revati Kumar; Daniel G Kuroda
Journal:  J Chem Phys       Date:  2015-06-07       Impact factor: 3.488

4.  Zwitterionic Ligands Bound to CdSe/ZnS Quantum Dots Prevent Adhesion to Mammalian Cells.

Authors:  Ryan F Landis; Rui Tang; Singyuk Hou; Mahdieh Yazdani; Yiwei Lee; Vincent M Rotello
Journal:  Phosphorus Sulfur Silicon Relat Elem       Date:  2015-10-02

5.  Bacteria-Resistant, Transparent, Free-Standing Films Prepared from Complex Coacervates.

Authors:  Irene S Kurtz; Shuo Sui; Xi Hao; Mengfei Huang; Sarah L Perry; Jessica D Schiffman
Journal:  ACS Appl Bio Mater       Date:  2019-08-13

6.  Antifouling Electrospun Nanofiber Mats Functionalized with Polymer Zwitterions.

Authors:  Kristopher W Kolewe; Kerianne M Dobosz; Katrina A Rieger; Chia-Chih Chang; Todd Emrick; Jessica D Schiffman
Journal:  ACS Appl Mater Interfaces       Date:  2016-10-06       Impact factor: 9.229

7.  Antifouling Ultrafiltration Membranes with Retained Pore Size by Controlled Deposition of Zwitterionic Polymers and Poly(ethylene glycol).

Authors:  Kerianne M Dobosz; Christopher A Kuo-LeBlanc; Todd Emrick; Jessica D Schiffman
Journal:  Langmuir       Date:  2018-09-11       Impact factor: 3.882

8.  Highly sensitive dual mode electrochemical platform for microRNA detection.

Authors:  Pawan Jolly; Marina R Batistuti; Anna Miodek; Pavel Zhurauski; Marcelo Mulato; Mark A Lindsay; Pedro Estrela
Journal:  Sci Rep       Date:  2016-11-08       Impact factor: 4.379

9.  Spontaneous detachment of Streptococcus mutans biofilm by synergistic effect between zwitterion and sugar alcohol.

Authors:  Jong Hyun Lim; Sang-Hun Song; Hyun-Sub Park; Jeong Rae Lee; Sang-Min Lee
Journal:  Sci Rep       Date:  2017-08-14       Impact factor: 4.379

Review 10.  Current and Emerging Approaches to Engineer Antibacterial and Antifouling Electrospun Nanofibers.

Authors:  Irene S Kurtz; Jessica D Schiffman
Journal:  Materials (Basel)       Date:  2018-06-22       Impact factor: 3.623

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