Literature DB >> 21173234

A network model for plant-pollinator community assembly.

Colin Campbell1, Suann Yang, Réka Albert, Katriona Shea.   

Abstract

Community assembly models, usually constructed for food webs, are an important component of our understanding of how ecological communities are formed. However, models for mutualistic community assembly are still needed, especially because these communities are experiencing significant anthropogenic disturbances that affect their biodiversity. Here, we present a unique network model that simulates the colonization and extinction process of mutualistic community assembly. We generate regional source pools of species interaction networks on the basis of statistical properties reported in the literature. We develop a dynamic synchronous Boolean framework to simulate, with few free parameters, the dynamics of new mutualistic community formation from the regional source pool. This approach allows us to deterministically map out every possible trajectory of community formation. This level of detail is rarely observed in other analytic approaches and allows for thorough analysis of the dynamical properties of community formation. As for food web assembly, we find that the number of stable communities is quite low, and the composition of the source pool influences the abundance and nature of community outcomes. However, in contrast to food web assembly, stable mutualistic communities form rapidly. Small communities with minor fluctuations in species presence/absence (self-similar limit cycles) are the most common community outcome. The unique application of this Boolean network approach to the study of mutualistic community assembly offers a great opportunity to improve our understanding of these critical communities.

Mesh:

Year:  2010        PMID: 21173234      PMCID: PMC3017189          DOI: 10.1073/pnas.1008204108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  36 in total

1.  The nested assembly of plant-animal mutualistic networks.

Authors:  Jordi Bascompte; Pedro Jordano; Carlos J Melián; Jens M Olesen
Journal:  Proc Natl Acad Sci U S A       Date:  2003-07-24       Impact factor: 11.205

2.  Asymmetric coevolutionary networks facilitate biodiversity maintenance.

Authors:  Jordi Bascompte; Pedro Jordano; Jens M Olesen
Journal:  Science       Date:  2006-04-21       Impact factor: 47.728

3.  The modularity of pollination networks.

Authors:  Jens M Olesen; Jordi Bascompte; Yoko L Dupont; Pedro Jordano
Journal:  Proc Natl Acad Sci U S A       Date:  2007-12-04       Impact factor: 11.205

Review 4.  Biological impacts and context of network theory.

Authors:  Eivind Almaas
Journal:  J Exp Biol       Date:  2007-05       Impact factor: 3.312

5.  Size-specific interaction patterns and size matching in a plant-pollinator interaction web.

Authors:  Martina Stang; Peter G L Klinkhamer; Nickolas M Waser; Ingo Stang; Eddy van der Meijden
Journal:  Ann Bot       Date:  2009-02-18       Impact factor: 4.357

6.  The architecture of mutualistic networks minimizes competition and increases biodiversity.

Authors:  Ugo Bastolla; Miguel A Fortuna; Alberto Pascual-García; Antonio Ferrera; Bartolo Luque; Jordi Bascompte
Journal:  Nature       Date:  2009-04-23       Impact factor: 49.962

Review 7.  Uniting pattern and process in plant-animal mutualistic networks: a review.

Authors:  Diego P Vázquez; Nico Blüthgen; Luciano Cagnolo; Natacha P Chacoff
Journal:  Ann Bot       Date:  2009-03-21       Impact factor: 4.357

8.  The coevolving web of life.

Authors:  John N Thompson
Journal:  Am Nat       Date:  2009-02       Impact factor: 3.926

9.  The logical analysis of continuous, non-linear biochemical control networks.

Authors:  L Glass; S A Kauffman
Journal:  J Theor Biol       Date:  1973-04       Impact factor: 2.691

10.  Boolean network simulations for life scientists.

Authors:  István Albert; Juilee Thakar; Song Li; Ranran Zhang; Réka Albert
Journal:  Source Code Biol Med       Date:  2008-11-14
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  20 in total

1.  Pleistocene megafaunal interaction networks became more vulnerable after human arrival.

Authors:  Mathias M Pires; Paul L Koch; Richard A Fariña; Marcus A M de Aguiar; Sérgio F dos Reis; Paulo R Guimarães
Journal:  Proc Biol Sci       Date:  2015-09-07       Impact factor: 5.349

2.  Network model of immune responses reveals key effectors to single and co-infection dynamics by a respiratory bacterium and a gastrointestinal helminth.

Authors:  Juilee Thakar; Ashutosh K Pathak; Lisa Murphy; Réka Albert; Isabella M Cattadori
Journal:  PLoS Comput Biol       Date:  2012-01-12       Impact factor: 4.475

3.  Do food web models reproduce the structure of mutualistic networks?

Authors:  Mathias M Pires; Paulo I Prado; Paulo R Guimarães
Journal:  PLoS One       Date:  2011-11-02       Impact factor: 3.240

4.  Cell fate reprogramming by control of intracellular network dynamics.

Authors:  Jorge G T Zañudo; Réka Albert
Journal:  PLoS Comput Biol       Date:  2015-04-07       Impact factor: 4.475

5.  Function does not follow form in gene regulatory circuits.

Authors:  Joshua L Payne; Andreas Wagner
Journal:  Sci Rep       Date:  2015-08-20       Impact factor: 4.379

6.  Inference of Network Dynamics and Metabolic Interactions in the Gut Microbiome.

Authors:  Steven N Steinway; Matthew B Biggs; Thomas P Loughran; Jason A Papin; Reka Albert
Journal:  PLoS Comput Biol       Date:  2015-06-23       Impact factor: 4.475

7.  Minimal effects of an invasive flowering shrub on the pollinator community of native forbs.

Authors:  Y Anny Chung; Laura A Burkle; Tiffany M Knight
Journal:  PLoS One       Date:  2014-10-24       Impact factor: 3.240

8.  Modeling the building blocks of biodiversity.

Authors:  Lucas N Joppa; Rich Williams
Journal:  PLoS One       Date:  2013-02-27       Impact factor: 3.240

9.  Supporting crop pollinators with floral resources: network-based phenological matching.

Authors:  Laura Russo; Nelson Debarros; Suann Yang; Katriona Shea; David Mortensen
Journal:  Ecol Evol       Date:  2013-08-02       Impact factor: 2.912

10.  Stabilization of perturbed Boolean network attractors through compensatory interactions.

Authors:  Colin Campbell; Réka Albert
Journal:  BMC Syst Biol       Date:  2014-05-08
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