Literature DB >> 21170608

Proof-editing is the bottleneck of 3D neuron reconstruction: the problem and solutions.

Hanchuan Peng1, Fuhui Long, Ting Zhao, Eugene Myers.   

Abstract

Mesh：

Year:  2011        PMID： 21170608     DOI： 10.1007/s12021-010-9090-x

Source DB:  PubMed          Journal:  Neuroinformatics        ISSN： 1539-2791


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  26 in total

1.  The DIADEM metric: comparing multiple reconstructions of the same neuron.

Authors:  Todd A Gillette; Kerry M Brown; Giorgio A Ascoli
Journal:  Neuroinformatics       Date:  2011-09

2.  The Filament Editor: an interactive software environment for visualization, proof-editing and analysis of 3D neuron morphology.

Authors:  Vincent J Dercksen; Hans-Christian Hege; Marcel Oberlaender
Journal:  Neuroinformatics       Date:  2014-04

3.  TraceMontage: A method for merging multiple independent neuronal traces.

Authors:  Aslan S Dizaji; Logan A Walker; Dawen Cai
Journal:  J Neurosci Methods       Date:  2019-12-24       Impact factor: 2.390

4.  Automatic Dendritic Length Quantification for High Throughput Screening of Mature Neurons.

Authors:  Timothy Smafield; Venkat Pasupuleti; Kamal Sharma; Richard L Huganir; Bing Ye; Jie Zhou
Journal:  Neuroinformatics       Date:  2015-10

Review 5.  Computational methods and challenges for large-scale circuit mapping.

Authors:  Moritz Helmstaedter; Partha P Mitra
Journal:  Curr Opin Neurobiol       Date:  2012-01-03       Impact factor: 6.627

6.  PyNeval: A Python Toolbox for Evaluating Neuron Reconstruction Performance.

Authors:  Han Zhang; Chao Liu; Yifei Yu; Jianhua Dai; Ting Zhao; Nenggan Zheng
Journal:  Front Neuroinform       Date:  2022-01-28       Impact factor: 4.081

7.  A Virtual Reality Visualization Tool for Neuron Tracing.

Authors:  Will Usher; Pavol Klacansky; Frederick Federer; Peer-Timo Bremer; Aaron Knoll; Jeff Yarch; Alessandra Angelucci; Valerio Pascucci
Journal:  IEEE Trans Vis Comput Graph       Date:  2017-08-29       Impact factor: 4.579

8.  Fuzzy-Logic Based Detection and Characterization of Junctions and Terminations in Fluorescence Microscopy Images of Neurons.

Authors:  Miroslav Radojević; Ihor Smal; Erik Meijering
Journal:  Neuroinformatics       Date:  2016-04

9.  Vectorization of optically sectioned brain microvasculature: learning aids completion of vascular graphs by connecting gaps and deleting open-ended segments.

Authors:  John P Kaufhold; Philbert S Tsai; Pablo Blinder; David Kleinfeld
Journal:  Med Image Anal       Date:  2012-06-26       Impact factor: 8.545

10.  Improving the Usability of Virtual Reality Neuron Tracing with Topological Elements.

Authors:  Torin McDonald; Will Usher; Nate Morrical; Attila Gyulassy; Steve Petruzza; Frederick Federer; Alessandra Angelucci; Valerio Pascucci
Journal:  IEEE Trans Vis Comput Graph       Date:  2021-01-28       Impact factor: 4.579
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