Literature DB >> 21164209

Study design and statistical analysis of data in human population studies with the micronucleus assay.

Marcello Ceppi1, Fabio Gallo, Stefano Bonassi.   

Abstract

The most common study design performed in population studies based on the micronucleus (MN) assay, is the cross-sectional study, which is largely performed to evaluate the DNA damaging effects of exposure to genotoxic agents in the workplace, in the environment, as well as from diet or lifestyle factors. Sample size is still a critical issue in the design of MN studies since most recent studies considering gene-environment interaction, often require a sample size of several hundred subjects, which is in many cases difficult to achieve. The control of confounding is another major threat to the validity of causal inference. The most popular confounders considered in population studies using MN are age, gender and smoking habit. Extensive attention is given to the assessment of effect modification, given the increasing inclusion of biomarkers of genetic susceptibility in the study design. Selected issues concerning the statistical treatment of data have been addressed in this mini-review, starting from data description, which is a critical step of statistical analysis, since it allows to detect possible errors in the dataset to be analysed and to check the validity of assumptions required for more complex analyses. Basic issues dealing with statistical analysis of biomarkers are extensively evaluated, including methods to explore the dose-response relationship among two continuous variables and inferential analysis. A critical approach to the use of parametric and non-parametric methods is presented, before addressing the issue of most suitable multivariate models to fit MN data. In the last decade, the quality of statistical analysis of MN data has certainly evolved, although even nowadays only a small number of studies apply the Poisson model, which is the most suitable method for the analysis of MN data.

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Year:  2011        PMID: 21164209     DOI: 10.1093/mutage/geq060

Source DB:  PubMed          Journal:  Mutagenesis        ISSN: 0267-8357            Impact factor:   3.000


  8 in total

1.  Mechanisms leading to the formation of micronuclei containing sex chromosomes differ with age.

Authors:  Kimberly H Jones; Timothy P York; Colleen Jackson-Cook
Journal:  Mutat Res       Date:  2012-05-18       Impact factor: 2.433

2.  Inter-individual variability in the response of human peripheral blood lymphocytes to ionizing radiation: comparison of the dicentric and micronucleus assays.

Authors:  Jelena Pajic; Boban Rakic; Branislav Rovcanin; Dubravka Jovicic; Ivana Novakovic; Aleksandar Milovanovic; Vesna Pajic
Journal:  Radiat Environ Biophys       Date:  2015-04-24       Impact factor: 1.925

3.  Arsenic and lead contamination in urban soils of Villa de la Paz (Mexico) affected by historical mine wastes and its effect on children's health studied by micronucleated exfoliated cells assay.

Authors:  Sandra P Gamiño-Gutiérrez; C Ivonne González-Pérez; María E Gonsebatt; Marcos G Monroy-Fernández
Journal:  Environ Geochem Health       Date:  2012-06-27       Impact factor: 4.609

4.  Perceived Stress Levels, Chemotherapy, Radiation Treatment and Tumor Characteristics Are Associated with a Persistent Increased Frequency of Somatic Chromosomal Instability in Women Diagnosed with Breast Cancer: A One Year Longitudinal Study.

Authors:  Noran Aboalela; Debra Lyon; R K Elswick; Debra Lynch Kelly; Jenni Brumelle; Harry D Bear; Colleen Jackson-Cook
Journal:  PLoS One       Date:  2015-07-15       Impact factor: 3.240

5.  Letter to Editor Re: Fang et al entitled "Assessment of Genomic Instability in Medical Workers Exposed to Chronic Low-Dose X-Rays in Northern China".

Authors:  Kanokporn Noy Rithidech; S M J Mortazavi; Antone L Brooks
Journal:  Dose Response       Date:  2020-06-10       Impact factor: 2.658

6.  Trisomy 21-associated increases in chromosomal instability are unmasked by comparing isogenic trisomic/disomic leukocytes from people with mosaic Down syndrome.

Authors:  Kelly Rafferty; Kellie J Archer; Kristi Turner; Ruth Brown; Colleen Jackson-Cook
Journal:  PLoS One       Date:  2021-07-20       Impact factor: 3.240

Review 7.  Genotoxic Effect in Autoimmune Diseases Evaluated by the Micronucleus Test Assay: Our Experience and Literature Review.

Authors:  Olivia Torres-Bugarín; Nicole Macriz Romero; María Luisa Ramos Ibarra; Aurelio Flores-García; Penélope Valdez Aburto; María Guadalupe Zavala-Cerna
Journal:  Biomed Res Int       Date:  2015-08-03       Impact factor: 3.411

Review 8.  Potential uses, limitations, and basic procedures of micronuclei and nuclear abnormalities in buccal cells.

Authors:  Olivia Torres-Bugarín; María Guadalupe Zavala-Cerna; Arnulfo Nava; Aurelio Flores-García; María Luisa Ramos-Ibarra
Journal:  Dis Markers       Date:  2014-02-04       Impact factor: 3.434

  8 in total

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