Literature DB >> 21153717

A novel transcript of oil palm (Elaeis guineensis Jacq.), Eg707, is specifically upregulated in tissues related to totipotency.

Vinh Thuc Le1, Norashikin Sarpan, Ky Huynh, Siew-Eng Ooi, Suhaimi Napis, Chai-Ling Ho, Meilina Ong-Abdullah, Chiew-Foan Chin, Parameswari Namasivayam.   

Abstract

In this study, we report the molecular characterization of clone Eg707 isolated from cell suspension culture of the oil palm. The deduced polypeptide of clone Eg707 is highly similar to an unknown protein from Arabidopsis thaliana. The presence of an Ald-Xan-dh-C2 superfamily domain in the deduced protein sequence suggested that Eg707 protein might be involved in abscisic acid biosynthesis. Eg707 might be present as a single copy gene in the oil palm genome. This gene is highly expressed in tissue cultured materials compared to vegetative and reproductive tissues, suggesting a role of this gene during oil palm somatic embryogenesis or at the early stages of embryo development. Expression analysis of Eg707 by RNA in situ hybridization showed that Eg707 transcripts were present throughout somatic embryo development starting from proembryo formation at the embryogenic callus stages till the maturing embryo stages. Since proembryo formation within the embryogenic callus is one of the first key factors in oil palm somatic embryo development, it is suggested that Eg707 could be used as a reliable molecular marker for detecting early stage of oil palm somatic embryogenesis.

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Year:  2011        PMID: 21153717     DOI: 10.1007/s12033-010-9356-4

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.695


  24 in total

1.  The Arabidopsis SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 gene is expressed in developing ovules and embryos and enhances embryogenic competence in culture.

Authors:  V Hecht; J P Vielle-Calzada; M V Hartog; E D Schmidt; K Boutilier; U Grossniklaus; S C de Vries
Journal:  Plant Physiol       Date:  2001-11       Impact factor: 8.340

2.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

Authors:  K J Livak; T D Schmittgen
Journal:  Methods       Date:  2001-12       Impact factor: 3.608

3.  Expressed sequence tags: alternative or complement to whole genome sequences?

Authors:  Stephen Rudd
Journal:  Trends Plant Sci       Date:  2003-07       Impact factor: 18.313

4.  Spatial expression of a sunflower SERK gene during induction of somatic embryogenesis and shoot organogenesis.

Authors:  Clément Thomas; Denise Meyer; Christophe Himber; André Steinmetz
Journal:  Plant Physiol Biochem       Date:  2004-01       Impact factor: 4.270

5.  Analysis of expressed sequence tags from oil palm (Elaeis guineensis).

Authors:  Stefan Jouannic; Xavier Argout; Frédéric Lechauve; Cécile Fizames; Alain Borgel; Fabienne Morcillo; Frédérique Aberlenc-Bertossi; Yves Duval; James Tregear
Journal:  FEBS Lett       Date:  2005-04-18       Impact factor: 4.124

6.  Molecular aspects of somatic-to-embryogenic transition in plants.

Authors:  Omid Karami; Behzad Aghavaisi; Aghil Mahmoudi Pour
Journal:  J Chem Biol       Date:  2009-09-10

7.  Protein staining of ribboned epon sections for light microscopy.

Authors:  D B Fisher
Journal:  Histochemie       Date:  1968

8.  Genomic sequencing.

Authors:  G M Church; W Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  1984-04       Impact factor: 11.205

9.  The Arabidopsis aldehyde oxidase 3 (AAO3) gene product catalyzes the final step in abscisic acid biosynthesis in leaves.

Authors:  M Seo; A J Peeters; H Koiwai; T Oritani; A Marion-Poll; J A Zeevaart; M Koornneef; Y Kamiya; T Koshiba
Journal:  Proc Natl Acad Sci U S A       Date:  2000-11-07       Impact factor: 11.205

10.  Two new alleles of the abscisic aldehyde oxidase 3 gene reveal its role in abscisic acid biosynthesis in seeds.

Authors:  Miguel González-Guzmán; David Abia; Julio Salinas; Ramón Serrano; Pedro L Rodríguez
Journal:  Plant Physiol       Date:  2004-04-30       Impact factor: 8.340

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  3 in total

1.  Overexpression of the oil palm (Elaeis guineensis Jacq.) TAPETUM DEVELOPMENT1-like Eg707 in rice affects cell division and differentiation and reduces fertility.

Authors:  Le Vinh Thuc; Danny Geelen; Huynh Ky; Siew-Eng Ooi; Suhaimi B Napis; Uma Rani Sinniah; Parameswari Namasivayam
Journal:  Mol Biol Rep       Date:  2012-10-21       Impact factor: 2.316

2.  Evaluation of reference genes for quantitative real-time PCR in oil palm elite planting materials propagated by tissue culture.

Authors:  Pek-Lan Chan; Ray J Rose; Abdul Munir Abdul Murad; Zamri Zainal; Eng-Ti Leslie Low; Leslie Cheng-Li Ooi; Siew-Eng Ooi; Suzaini Yahya; Rajinder Singh
Journal:  PLoS One       Date:  2014-06-13       Impact factor: 3.240

3.  Amino Acid and Secondary Metabolite Production in Embryogenic and Non-Embryogenic Callus of Fingerroot Ginger (Boesenbergia rotunda).

Authors:  Theresa Lee Mei Ng; Rezaul Karim; Yew Seong Tan; Huey Fang Teh; Asma Dazni Danial; Li Sim Ho; Norzulaani Khalid; David Ross Appleton; Jennifer Ann Harikrishna
Journal:  PLoS One       Date:  2016-06-03       Impact factor: 3.240

  3 in total

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