Literature DB >> 21152954

Population genetic structure of the point-head flounder, Cleisthenes herzensteini, in the Northwestern Pacific.

Yongshuang Xiao1, Yan Zhang, Takashi Yanagimoto, Jun Li, Zhizhong Xiao, Tianxiang Gao, Shihong Xu, Daoyuan Ma.   

Abstract

Intraspecific phylogenies can provide useful insights into how populations have been shaped by historical and contemporary processes. To determine the population genetic structure and the demographic and colonization history of Cleisthenes herzensteini in the Northwestern Pacific, one hundred and twenty-one individuals were sampled from six localities along the coastal regions of Japan and the Yellow Sea of China. Mitochondrial DNA variation was analyzed using DNA sequence data from the 5' end of control region. High levels of haplotype diversity (>0.96) were found for all populations, indicating a high level of genetic diversity. No pattern of isolation by distance was detected among the population differentiation throughout the examined range. Analyses of molecular variance (AMOVA) and the conventional population statistic Fst revealed no significant population genetic structure among populations. According to the exact test of differentiation among populations, the null hypothesis that C. herzensteini within the examined range constituted a non-differential mtDNA gene pool was accepted. The demographic history of C. herzensteini was examined using neutrality test and mismatch distribution analyses and results indicated Pleistocene population expansion (about 94-376 kya) in the species, which was consistent with the inference result of nested clade phylogeographical analysis (NCPA) showing contiguous range expansion for C. herzensteini. The lack of phylogeographical structure for the species may reflect a recent range expansion after the glacial maximum and insufficient time to attain migration-drift equilibrium.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 21152954     DOI: 10.1007/s10709-010-9536-y

Source DB:  PubMed          Journal:  Genetica        ISSN: 0016-6707            Impact factor:   1.082


  38 in total

1.  Estimation of past demographic parameters from the distribution of pairwise differences when the mutation rates vary among sites: application to human mitochondrial DNA.

Authors:  S Schneider; L Excoffier
Journal:  Genetics       Date:  1999-07       Impact factor: 4.562

2.  Intraspecific gene genealogies: trees grafting into networks.

Authors: 
Journal:  Trends Ecol Evol       Date:  2001-01-01       Impact factor: 17.712

Review 3.  The genetic legacy of the Quaternary ice ages.

Authors:  G Hewitt
Journal:  Nature       Date:  2000-06-22       Impact factor: 49.962

4.  Statistical phylogeography: methods of evaluating and minimizing inference errors.

Authors:  Alan R Templeton
Journal:  Mol Ecol       Date:  2004-04       Impact factor: 6.185

5.  The impact of population expansion and mutation rate heterogeneity on DNA sequence polymorphism.

Authors:  S Aris-Brosou; L Excoffier
Journal:  Mol Biol Evol       Date:  1996-03       Impact factor: 16.240

6.  Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection.

Authors:  Y X Fu
Journal:  Genetics       Date:  1997-10       Impact factor: 4.562

7.  Statistical method for testing the neutral mutation hypothesis by DNA polymorphism.

Authors:  F Tajima
Journal:  Genetics       Date:  1989-11       Impact factor: 4.562

8.  Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers.

Authors:  T D Kocher; W K Thomas; A Meyer; S V Edwards; S Pääbo; F X Villablanca; A C Wilson
Journal:  Proc Natl Acad Sci U S A       Date:  1989-08       Impact factor: 11.205

9.  Phylogeographical structure of the Dover sole Microstomus pacificus: the larval retention hypothesis and genetic divergence along the deep continental slope of the northeastern Pacific Ocean.

Authors:  C A Stepien
Journal:  Mol Ecol       Date:  1999-06       Impact factor: 6.185

10.  Isolation by distance, web service.

Authors:  Jeffrey L Jensen; Andrew J Bohonak; Scott T Kelley
Journal:  BMC Genet       Date:  2005-03-11       Impact factor: 2.797

View more
  1 in total

1.  Population genetics and phylogeography of Tabanus bromius (Diptera: Tabanidae).

Authors:  Sumeyra Nur Sanal Demirci; Volkan Kilic; Serap Mutun; A Yavuz Kilic
Journal:  Parasit Vectors       Date:  2021-09-06       Impact factor: 3.876

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.