Literature DB >> 21152337

Linked Exploratory Visualizations for Uncertain MR Spectroscopy Data.

David Feng, Lester Kwock, Yueh Lee, Russell M Taylor.   

Abstract

We present a system for visualizing magnetic resonance spectroscopy (MRS) data sets. Using MRS, radiologists generate multiple 3D scalar fields of metabolite concentrations within the brain and compare them to anatomical magnetic resonance imaging. By understanding the relationship between metabolic makeup and anatomical structure, radiologists hope to better diagnose and treat tumors and lesions. Our system consists of three linked visualizations: a spatial glyph-based technique we call Scaled Data-Driven Spheres, a parallel coordinates visualization augmented to incorporate uncertainty in the data, and a slice plane for accurate data value extraction. The parallel coordinates visualization uses specialized brush interactions designed to help users identify nontrivial linear relationships between scalar fields. We describe two novel contributions to parallel coordinates visualizations: linear function brushing and new axis construction. Users have discovered significant relationships among metabolites and anatomy by linking interactions between the three visualizations.

Entities:  

Year:  2010        PMID: 21152337      PMCID: PMC2997734          DOI: 10.1117/12.839818

Source DB:  PubMed          Journal:  Vis Data Anal


  10 in total

Review 1.  Multivariate image analysis in biomedicine.

Authors:  Tim W Nattkemper
Journal:  J Biomed Inform       Date:  2004-10       Impact factor: 6.317

2.  Comprehensive processing, display and analysis for in vivo MR spectroscopic imaging.

Authors:  A A Maudsley; A Darkazanli; J R Alger; L O Hall; N Schuff; C Studholme; Y Yu; A Ebel; A Frew; D Goldgof; Y Gu; R Pagare; F Rousseau; K Sivasankaran; B J Soher; P Weber; K Young; X Zhu
Journal:  NMR Biomed       Date:  2006-06       Impact factor: 4.044

3.  Multifield-graphs: an approach to visualizing correlations in multifield scalar data.

Authors:  Natascha Sauber; Holger Theisel; Hans-Peter Seidel
Journal:  IEEE Trans Vis Comput Graph       Date:  2006 Sep-Oct       Impact factor: 4.579

4.  Multi-variate, time-varying, and comparative visualization with contextual cues.

Authors:  Jonathan Woodring; Han-Wei Shen
Journal:  IEEE Trans Vis Comput Graph       Date:  2006 Sep-Oct       Impact factor: 4.579

5.  Diffusion tensor visualization with glyph packing.

Authors:  Gordon Kindlmann; Carl-Fredrik Westin
Journal:  IEEE Trans Vis Comput Graph       Date:  2006 Sep-Oct       Impact factor: 4.579

Review 6.  Magnetic resonance spectroscopy of the brain: review of metabolites and clinical applications.

Authors:  D P Soares; M Law
Journal:  Clin Radiol       Date:  2008-08-30       Impact factor: 2.350

7.  Rolling the dice: multidimensional visual exploration using scatterplot matrix navigation.

Authors:  Niklas Elmqvist; Pierre Dragicevic; Jean-Daniel Fekete
Journal:  IEEE Trans Vis Comput Graph       Date:  2008 Nov-Dec       Impact factor: 4.579

8.  Image-fusion of MR spectroscopic images for treatment planning of gliomas.

Authors:  Jenghwa Chang; Sunitha Thakur; Gerard Perera; Alex Kowalski; Wei Huang; Sasan Karimi; Margie Hunt; Jason Koutcher; Zvi Fuks; Howard Amols; Ashwatha Narayana
Journal:  Med Phys       Date:  2006-01       Impact factor: 4.071

9.  Estimation of metabolite concentrations from localized in vivo proton NMR spectra.

Authors:  S W Provencher
Journal:  Magn Reson Med       Date:  1993-12       Impact factor: 4.668

10.  Exploration and visualization of gene expression with neuroanatomy in the adult mouse brain.

Authors:  Christopher Lau; Lydia Ng; Carol Thompson; Sayan Pathak; Leonard Kuan; Allan Jones; Mike Hawrylycz
Journal:  BMC Bioinformatics       Date:  2008-03-18       Impact factor: 3.169

  10 in total
  2 in total

1.  Matching visual saliency to confidence in plots of uncertain data.

Authors:  David Feng; Lester Kwock; Yueh Lee; Russell M Taylor
Journal:  IEEE Trans Vis Comput Graph       Date:  2010 Nov-Dec       Impact factor: 4.579

2.  Visualization for Understanding Uncertainty in Activation Volumes for Deep Brain Stimulation.

Authors:  Brad E Hollister; Gordon Duffley; Chris Butson; Chris Johnson; Paul Rosen
Journal:  Eurograph IEEE VGTC Symp Vis       Date:  2016
  2 in total

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