Literature DB >> 21147058

Molecular basis for the inability of an oxygen atom donor ligand to replace the natural sulfur donor heme axial ligand in cytochrome P450 catalysis. Spectroscopic characterization of the Cys436Ser CYP2B4 mutant.

Roshan Perera1, Masanori Sono, Heather L Voegtle, John H Dawson.   

Abstract

All cytochrome P450s (CYPs) contain a cysteinate heme iron proximal ligand that plays a crucial role in their mechanism of action. Conversion of the proximal Cys436 to Ser in NH(2)-truncated microsomal CYP2B4CYP2B4) transforms the enzyme into a two-electron NADPH oxidase producing H(2)O(2) without monooxygenase activity [K.P. Vatsis, H.M. Peng, M.J. Coon, J. Inorg. Biochem. 91 (2002) 542-553]. To examine the effects of this ligation change on the heme iron spin-state and coordination structure of ΔC436S CYP2B4, the magnetic circular dichroism and electronic absorption spectra of several oxidation/ligation states of the variant have been measured and compared with those of structurally defined heme complexes. The spectra of the substrate-free ferric mutant are indicative of a high-spin five-coordinate structure ligated by anionic serinate. The spectroscopic properties of the dithionite-reduced (deoxyferrous) protein are those of a five-coordinate (high-spin) state, and it is concluded that the proximal ligand has been protonated to yield neutral serine (ROH-donor). Low-spin six-coordinate ferrous complexes of the mutant with neutral sixth ligands (NO, CO, and O(2)) examined are also likely ligated by neutral serine, as would be expected for ferric complexes with anionic sixth ligands such as the hydroperoxo-ferric catalytic intermediate. Ligation of the heme iron by neutral serine vs. deprotonated cysteine is likely the result of the large difference in their acidity. Thus, without the necessary proximal ligand push of the cysteinate, although the ΔC436S mutant can accept two electrons and two protons, it is unable to heterolytically cleave the O-O bond of the hydroperoxo-ferric species to generate Compound I and hydroxylate the substrate.
Copyright © 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 21147058      PMCID: PMC3050543          DOI: 10.1016/j.abb.2010.12.010

Source DB:  PubMed          Journal:  Arch Biochem Biophys        ISSN: 0003-9861            Impact factor:   4.013


  36 in total

1.  Heme-Containing Oxygenases.

Authors:  Masanori Sono; Mark P. Roach; Eric D. Coulter; John H. Dawson
Journal:  Chem Rev       Date:  1996-11-07       Impact factor: 60.622

2.  Identification of the binding site on cytochrome P450 2B4 for cytochrome b5 and cytochrome P450 reductase.

Authors:  A Bridges; L Gruenke; Y T Chang; I A Vakser; G Loew; L Waskell
Journal:  J Biol Chem       Date:  1998-07-03       Impact factor: 5.157

3.  Roles of the axial push effect in cytochrome P450cam studied with the site-directed mutagenesis at the heme proximal site.

Authors:  S Yoshioka; S Takahashi; K Ishimori; I Morishima
Journal:  J Inorg Biochem       Date:  2000-08-31       Impact factor: 4.155

4.  Assignment of the heme axial ligand(s) for the ferric myoglobin (H93G) and heme oxygenase (H25A) cavity mutants as oxygen donors using magnetic circular dichroism.

Authors:  A E Pond; M P Roach; M Sono; A H Rux; S Franzen; R Hu; M R Thomas; A Wilks; Y Dou; M Ikeda-Saito; P R Ortiz de Montellano; W H Woodruff; S G Boxer; J H Dawson
Journal:  Biochemistry       Date:  1999-06-08       Impact factor: 3.162

5.  Roles of the proximal heme thiolate ligand in cytochrome p450(cam).

Authors:  K Auclair; P Moënne-Loccoz; P R Ortiz de Montellano
Journal:  J Am Chem Soc       Date:  2001-05-30       Impact factor: 15.419

6.  Engineering cytochrome c peroxidase into cytochrome P450: a proximal effect on heme-thiolate ligation.

Authors:  J A Sigman; A E Pond; J H Dawson; Y Lu
Journal:  Biochemistry       Date:  1999-08-24       Impact factor: 3.162

7.  Stabilization and spectroscopic characterization of the dioxygen complex of wild-type cytochrome P4502B4 (CYP2B4) and its distal side E301Q, T302A and proximal side F429H mutants at subzero temperatures.

Authors:  Roshan Perera; Masanori Sono; Ryan Kinloch; Haoming Zhang; Michael Tarasev; Sang-Choul Im; Lucy Waskell; John H Dawson
Journal:  Biochim Biophys Acta       Date:  2010-07-13

8.  Identification of histidine 25 as the heme ligand in human liver heme oxygenase.

Authors:  J Sun; T M Loehr; A Wilks; P R Ortiz de Montellano
Journal:  Biochemistry       Date:  1994-11-22       Impact factor: 3.162

9.  The proximal ligand variant His93Tyr of horse heart myoglobin.

Authors:  D P Hildebrand; D L Burk; R Maurus; J C Ferrer; G D Brayer; A G Mauk
Journal:  Biochemistry       Date:  1995-02-14       Impact factor: 3.162

10.  Subcellular localization, aggregation state, and catalytic activity of microsomal P450 cytochromes modified in the NH2-terminal region and expressed in Escherichia coli.

Authors:  S J Pernecky; N M Olken; L L Bestervelt; M J Coon
Journal:  Arch Biochem Biophys       Date:  1995-04-20       Impact factor: 4.013

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  7 in total

1.  Coordination modes of tyrosinate-ligated catalase-type heme enzymes: magnetic circular dichroism studies of Plexaura homomalla allene oxide synthase, Mycobacterium avium ssp. paratuberculosis protein-2744c, and bovine liver catalase in their ferric and ferrous states.

Authors:  D M Indika Bandara; Masanori Sono; Grant S Bruce; Alan R Brash; John H Dawson
Journal:  J Inorg Biochem       Date:  2011-09-22       Impact factor: 4.155

2.  Improved cyclopropanation activity of histidine-ligated cytochrome P450 enables the enantioselective formal synthesis of levomilnacipran.

Authors:  Z Jane Wang; Hans Renata; Nicole E Peck; Christopher C Farwell; Pedro S Coelho; Frances H Arnold
Journal:  Angew Chem Int Ed Engl       Date:  2014-05-06       Impact factor: 15.336

3.  The Mycobacterium tuberculosis secreted protein Rv0203 transfers heme to membrane proteins MmpL3 and MmpL11.

Authors:  Cedric P Owens; Nicholas Chim; Amanda B Graves; Christine A Harmston; Angelina Iniguez; Heidi Contreras; Matthew D Liptak; Celia W Goulding
Journal:  J Biol Chem       Date:  2013-06-11       Impact factor: 5.157

4.  Structural Adaptability Facilitates Histidine Heme Ligation in a Cytochrome P450.

Authors:  John A McIntosh; Thomas Heel; Andrew R Buller; Linda Chio; Frances H Arnold
Journal:  J Am Chem Soc       Date:  2015-09-23       Impact factor: 15.419

5.  A serine-substituted P450 catalyzes highly efficient carbene transfer to olefins in vivo.

Authors:  Pedro S Coelho; Z Jane Wang; Maraia E Ener; Stefanie A Baril; Arvind Kannan; Frances H Arnold; Eric M Brustad
Journal:  Nat Chem Biol       Date:  2013-06-23       Impact factor: 15.040

6.  A redox-mediated Kemp eliminase.

Authors:  Aitao Li; Binju Wang; Adriana Ilie; Kshatresh D Dubey; Gert Bange; Ivan V Korendovych; Sason Shaik; Manfred T Reetz
Journal:  Nat Commun       Date:  2017-03-28       Impact factor: 14.919

7.  Enantioselective Enzyme-Catalyzed Aziridination Enabled by Active-Site Evolution of a Cytochrome P450.

Authors:  Christopher C Farwell; Ruijie K Zhang; John A McIntosh; Todd K Hyster; Frances H Arnold
Journal:  ACS Cent Sci       Date:  2015-04-22       Impact factor: 14.553

  7 in total

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