| Literature DB >> 21141945 |
Federica Maratini1, Luciano Pandolfo, Maria Bendova, Ulrich Schubert, Matthias Bauer, Massimiliano Rocchia, Alfonso Venzo, Eugenio Tondello, Silvia Gross.
Abstract
Three different zirconium thio and oxothio clusters, characterized by different coordination modes of dithioacetate and/or monothioacetate ligands, were obtained by the reaction of monothioacetic acid with zirconium n-butoxide, Zr(O(n)Bu)4, in different experimental conditions. In particular, we isolated the three polynuclear Zr3(μ3-SSSCCH3)2(SSCCH3)6·2(n)BuOH (Zr3), Zr4(μ3-O)2(μ-η(1)-SOCCH3)2(SOCCH3)8(O(n)Bu)2 (Zr4), and Zr6(μ3-O)5(μ-SOCCH3)2(μ-OOCCH3)(SOCCH3)11((n)BuOH) (Zr6) derivatives, presenting some peculiar characteristics. Zr6 has an unusual star-shaped structure. Only sulfur-based ligands, viz., chelating dithioacetate monoanions and an unusual ethane-1,1,1-trithiolate group μ3 coordinating the Zr ions, were observed in the case of Zr3. 1D and 2D NMR analyses confirmed the presence of differently coordinated ligands. Raman spectroscopy was further used to characterize the new polynuclear complexes. Time-resolved extended X-ray absorption fine structure measurements, devoted to unraveling the cluster formation mechanisms, evidenced a fast coordination of sulfur ligands and subsequent relatively rapid rearrangements.Entities:
Mesh:
Substances:
Year: 2010 PMID: 21141945 PMCID: PMC3018348 DOI: 10.1021/ic1013768
Source DB: PubMed Journal: Inorg Chem ISSN: 0020-1669 Impact factor: 5.165
Summary of Crystallographic Parameters for Zr, Zr, and Zr
| formula | C26H44O2S18Zr3 | C32H52O21S13Zr6 | C28H48O14S10Zr4 |
| fw | 1239.35 | 1736.84 | 1294.14 |
| cryst size, mm | 0.32 × 0.27 × 0.18 | 0.09 × 0.07 × 0.06 | 0.18 × 0.05 × 0.05 |
| cryst syst | monoclinic | monoclinic | monoclinic |
| space group | |||
| 1990.20(9) | 1969.8(3) | 1017.22(11) | |
| 1644.69(8) | 1473.29(19) | 1346.39(14) | |
| 1409.98(6) | 2143.2(3) | 1811.02(19) | |
| β, deg | 99.272(1) | 95.130(2) | 101.170(2) |
| 4554.9(4) | 6194.9(14) | 2433.3(4) | |
| 4 | 4 | 2 | |
| ρcalcd, g cm−3 | 1.807 | 1.862 | 1.766 |
| μ(Mo Kα), mm−1 | 1.526 | 1.473 | 1.316 |
| θmax, deg | 28.33 | 28.31 | 27.50 |
| reflns measd | 25 482 | 42 823 | 15 851 |
| unique reflns | 25 546 | 15 359 | 5563 |
| rflns | 21 434 | 10 072 | 4414 |
| param | 238 | 784 | 258 |
| restraints | 67 | 422 | 0 |
| R1 [ | 0.0328 | 0.0477 | 0.0303 |
| wR2 [ | 0.0845 | 0.1178 | 0.0665 |
| GOF for | 1.025 | 1.019 | 1.007 |
| min/max, e Å−3 | 0.656/−0.654 | 2.447/−1.305 | 0.774/−0.679 |
Summary of Bond Lengths [pm] for Zr
| core | Zr1−S11 265.16(4), Zr1−S12′ 265.69(4), Zr1−S13 265.14(4), Zr1−S13′ 264.90(4), Zr2−S11 264.36(3), Zr2−S12 266.24(4) |
| μ3-SSSCCH3 | S11−C11 182.96(14), S12−C11 183.44(14), S13−C11 182.87(15) |
| μ1-SSCCH3 | Zr1−S21 268.97(4), Zr1−S22 262.96(4), Zr1−S31 264.17(4), Zr1−S32 268.97(4), Zr2−S41 270.37(4), Zr2−S42 262.59(4) |
Summary of Bond Lengths [pm] for Zr6 and Zr4
| Zr6 | Zr4 | |
|---|---|---|
| Core | Zr1−O1 220.5(4), Zr1−O2 222.5(4), Zr1−O3 206.9(4), Zr1−O4 213.8(4), Zr1−O5 218.7(4), Zr2−O1 209.8(4), Zr2−O5 204.5(4), Zr3−O1 197.7(4), Zr3−O2 202.6(4), Zr4−O3 205.1(4), Zr4−O2 208.5(4), Zr5−O3 201.9(4), Zr5−O4 209.3(4) | Zr1−O1 210.62(18), Zr2−O1 213.1(2), Zr2−O1′ 203.53(19) |
| μ1-SOCCH3 | Zr4−O08 229.3(4), Zr4−O091 224.1(9), Zr4−O093 222.4(16), Zr4−O10 230.1(4), Zr4−S08 265.87(16), Zr4−S091 270.9(3), Zr4−S093 267.5(9), Zr4−S10 276.03(17), Zr2−O04 224.4(4), Zr2−O031 230.7(8), Zr3−O05 224.1(4), Zr3−O06 223.7(4), Zr5−O11 226.5(4), Zr5−O12 226.8(5), Zr6−O14 221.7(5), Zr6−O15 223.9(5), Zr2−S04 271.61(17), Zr2−S031 270.8(2), Zr3−S05 269.20(16), Zr3−S06 267.63(17), Zr5−S11 269.95(17), Zr5−S12 272.85(18), Zr6−S14 271.76(18), Zr6−S15 270.24(18), Zr5−O10 271.5(4) | Zr1−O2 224.3(2), Zr1−O3 224.7(2), Zr2−O5 224.5(2), Zr2−O6 224.6(2), Zr1−S2 270.11(9), Zr1−S3 268.56(8), Zr2−S5 266.76(8), Zr2−S6 267.35(8) |
| μ2-SOCCH3 | Zr1−O01 209.2(4), Zr1−O02 208.0(4), Zr2−S01 274.66(17), Zr2−S02 281.63(16) | Zr2−O4 234.13(19), Zr2−S4 276.40(8), Zr1−O4 228.6(2) |
| μ1-(H)OnBu | Zr3−O071 222.0(8), Zr3−O075 217.9(10) | Zr1−O11 187.2(2) |
| μ2-OOCCH3 | Zr5−O131 218.9(5), Zr6−O132 217.4(4) |
Figure 4Raman spectra of monothioacetic acid (a) and Zr (b).
Results of the Reactions and Structures Obtained (M = Metal; L = Monothioacetic Acid)
| M:L | product(s) | structure | Dtpr (days) | |
|---|---|---|---|---|
| 1:8 | 288, Ar | Zr6 (yellow) | Zr6O5(SOCCH3)13(O2CCH3)(C4H9OH) | 30 |
| Zr3 (red) | Zr3(S3CCH3)2(S2CCH3)6 | 60 | ||
| 1:4 | 288, Ar | Zr3 (red) | Zr3(S3CCH3)2(S2CCH3)6 | 60 |
| 1:8 | 298, Ar | Zr4 (yellow) | Zr4O2(SOCCH3)10(C4H9O)2 | 0−10 |
| 1:5 | 273, Ar; 263, Ar | Zr4 (yellow) | Zr4O2(SOCCH3)10(C4H9O)2 | 10 |
| 1:5 | excess of H2S | small, red crystals | Zr3(S3CCH3)2(S2CCH3)6 | 30 |
Figure 1Crystal structure of Zr. H atoms were omitted for clarity.
Figure 2Crystal structure of Zr. H atoms were omitted for clarity.
Summary of the Coordination Modes of Zr Atoms in Zr
| Zr atom | coord. no. | ligands |
|---|---|---|
| Zr1 | 7 | 5 × O, 2 × O(μ2-SOCCH3) |
| Zr2 | 8 | 2 × O, 2 × S(μ2-SOCCH3), 2 × S,O(SOCCH3) |
| Zr3 | 7 | 2 × O, 2 × S,O(SOCCH3), 1 × O(HO |
| Zr4 | 8 | 2 × O, 3 × S,O(SOCCH3) |
| Zr5 | 7(8) | 2 × O, 2 × S,O(SOCCH3), 1 × O(μ2-O2CCH3), 1 × O(SOCCH3) |
| Zr6 | 7 | 2 × O, 2 × S,O(SOCCH3), 1 × O(μ2-O2CCH3) |
Figure 3Crystal structure of Zr. H atoms were omitted for clarity.
Figure 5Portion of 1H−13C HMBC spectrum of Zr.
Figure 6XANES spectra recorded for the references Zr(OnBu)4 and Zr and over the course of the reaction of Zr(OnBu)4 with 6 equiv of TAA at 278 K recorded at the times indicated in the graph. The spectra were shifted for clarity.
Figure 7Experimental k3χ(k) spectra (left) and their corresponding Fourier-transformed functions (left) of the references Zr(OnBu)4 and Zr also recorded over the course of the reaction of 1 mol of Zr(OnBu)4 with 6 mol of TAA at 278 K. The spectra were shifted for clarity.
Results from the Fitting of the Experimental EXAFS Spectra with Theoretical Models
| sample | Abs−Bs | σ | fit index | |||
|---|---|---|---|---|---|---|
| Zr(OnBu)4 | Zr−O1 | 1.8 ± 0.2 | 1.97 ± 0.02 | 0.032 ± 0.003 | ||
| Zr−O2 | 1.4 ± 0.1 | 2.12 ± 0.02 | 0.022 ± 0.002 | |||
| Zr−O3 | 2.0 ± 0.2 | 2.25 ± 0.02 | 0.045 ± 0.005 | |||
| Zr−Zr | 1.0 ± 0.3 | 3.55 ± 0.04 | 0.074 ± 0.022 | |||
| Zr−O1 | 2.09 ± 0.02 | 0.032 ± 0.003 | 27.51 | 1.23 | ||
| Zr−O2 | 2.22 ± 0.02 | 0.081 ± 0.008 | ||||
| Zr−S | 2.69 ± 0.02 | 0.112 ± 0.022 | ||||
| Zr−Zr1 | 3.30 ± 0.03 | 0.102 ± 0.020 | ||||
| Zr−Zr2 | 3.50 ± 0.04 | 0.092 ± 0.018 | ||||
| After 10 min. | Zr−O | 0.9 ± 0.1 | 1.93 ± 0.02 | 0.039 ± 0.004 | 31.24 | −0.08 |
| Zr−O | 5.1 ± 0.5 | 2.23 ± 0.02 | 0.084 ± 0.008 | |||
| Zr−S | 0.7 ± 0.1 | 2.72 ± 0.03 | 0.055 ± 0.006 | |||
| Zr−Zr1 | 1.9 ± 0.4 | 3.28 ± 0.03 | 0.102 ± 0.020 | |||
| Zr−Zr2 | 2.2 ± 0.4 | 3.48 ± 0.03 | 0.074 ± 0.015 | |||
| After 41 min. | Zr−O | 0.9 ± 0.1 | 1.92 ± 0.02 | 24.09 | −0.92 | |
| Zr−O | 4.9 ± 0.5 | 2.24 ± 0.02 | ||||
| Zr−S | 0.6 ± 0.1 | 2.74 ± 0.03 | ||||
| Zr−Zr1 | 1.5 ± 0.3 | 3.27 ± 0.03 | ||||
| Zr−Zr2 | 2.3 ± 0.4 | 3.49 ± 0.03 | ||||
| After 82 min. | Zr−O | 0.8 ± 0.1 | 1.93 ± 0.02 | 22.55 | 1.24 | |
| Zr−O | 4.9 ± 0.5 | 2.24 ± 0.02 | ||||
| Zr−S | 0.5 ± 0.1 | 2.76 ± 0.03 | ||||
| Zr−Zr1 | 1.4 ± 0.3 | 3.25 ± 0.03 | ||||
| Zr−Zr2 | 2.5 ± 0.4 | 3.49 ± 0.03 | ||||
| After 150 min. | Zr−O | 0.8 ± 0.1 | 1.94 ± 0.02 | 22.23 | −1.14 | |
| Zr−O | 5.1 ± 0.5 | 2.23 ± 0.02 | ||||
| Zr−S | 0.5 ± 0.1 | 2.77 ± 0.03 | ||||
| Zr−Zr1 | 1.1 ± 0.2 | 3.26 ± 0.03 | ||||
| Zr−Zr2 | 2.6 ± 0.5 | 3.50 ± 0.04 | ||||
| After 190 min. | Zr−O | 0.7 ± 0.1 | 1.93 ± 0.02 | 22.91 | −0.85 | |
| Zr−O | 5.3 ± 0.5 | 2.23 ± 0.02 | ||||
| Zr−S | 0.4 ± 0.1 | 2.77 ± 0.03 | ||||
| Zr−Zr1 | 1.1 ± 0.2 | 3.26 ± 0.03 | ||||
| Zr−Zr2 | 2.7 ± 0.5 | 3.50 ± 0.03 | ||||
| After 230 min. | Zr−O | 0.7 ± 0.1 | 1.93 ± 0.02 | 21.88 | −0.79 | |
| Zr−O | 5.4 ± 0.5 | 2.23 ± 0.02 | ||||
| Zr−S | 0.4 ± 0.1 | 2.77 ± 0.03 | ||||
| Zr−Zr1 | 0.9 ± 0.2 | 3.26 ± 0.03 | ||||
| Zr−Zr2 | 2.6 ± 0.5 | 3.50 ± 0.03 | ||||
| After 726 min. | Zr−O | 5.6 ± 0.6 | 2.22 ± 0.02 | 0.084 ± 0.008 | 25.62 | −0.65 |
| Zr−S | 0.2 ± 0.1 | 2.76 ± 0.03 | ||||
| Zr−Zr1 | 0.3 ± 0.1 | 3.23 ± 0.03 | ||||
| Zr−Zr2 | 2.5 ± 0.5 | 3.51 ± 0.03 | ||||
| After 1108 min. | Zr−O | 6.7 ± 0.7 | 2.20 ± 0.02 | 0.092 ± 0.008 | 25.93 | 0.79 |
| Zr−S | 0.1 ± 0.1 | 2.74 ± 0.03 | ||||
| Zr−Zr1 | 0.5 ± 0.1 | 3.20 ± 0.03 | ||||
| Zr−Zr2 | 2.8 ± 0.5 | 3.50 ± 0.03 |
Abs = X-ray-absorbing atom. Bs = backscatterer.
Number of backscattering atoms.
Distance between the X-ray absorber and the backscatterer.
Debye−Waller-like factor.
Quality of the fit.
Fermi energy, i.e., shift to account for discrepancies between the experimental and theoretical functions.
Values set to the crystallographic coordination numbers.
Set to the values of the sample after 10 min to ensure comparability.
Figure 8Summary of the kinetic changes in the individual neighbor shells over the course of the reaction according to Table 6.
Scheme 1Possible Reaction Patterns for the Formation of Oxo and Oxothio Clusters
Figure 9Hexathiaadamantane obtained by the reaction of TAA with AsI3, by Kniep and Reski.(54)
Scheme 2Reaction Conditions Leading to the Formation of Zr, Zr, and Zr