Literature DB >> 21133041

Invariance kernel of biological regulatory networks.

Jamil Ahmad1, Olivier Roux.   

Abstract

The analysis of Biological Regulatory Network (BRN) leads to the computing of the set of the possible behaviours of the biological components. These behaviours are seen as trajectories and we are specifically interested in cyclic trajectories since they stand for stability. The set of cycles is given by the so-called invariance kernel of a BRN. This paper presents a method for deriving symbolic formulae for the length, volume and diameter of a cylindrical invariance kernel. These formulae are expressed in terms of delay parameters expressions and give the existence of an invariance kernel and a hint of the number of cyclic trajectories.

Mesh:

Year:  2010        PMID: 21133041     DOI: 10.1504/ijdmb.2010.035900

Source DB:  PubMed          Journal:  Int J Data Min Bioinform        ISSN: 1748-5673            Impact factor:   0.667


  3 in total

1.  Modelling and analysis of the feeding regimen induced entrainment of hepatocyte circadian oscillators using petri nets.

Authors:  Samar Hayat Khan Tareen; Jamil Ahmad
Journal:  PLoS One       Date:  2015-03-19       Impact factor: 3.240

2.  Formal Modeling of mTOR Associated Biological Regulatory Network Reveals Novel Therapeutic Strategy for the Treatment of Cancer.

Authors:  Zurah Bibi; Jamil Ahmad; Amnah Siddiqa; Rehan Z Paracha; Tariq Saeed; Amjad Ali; Hussnain Ahmed Janjua; Shakir Ullah; Emna Ben Abdallah; Olivier Roux
Journal:  Front Physiol       Date:  2017-06-13       Impact factor: 4.566

3.  Deciphering the expression dynamics of ANGPTL8 associated regulatory network in insulin resistance using formal modelling approaches.

Authors:  Amnah Siddiqa; Jamil Ahmad; Amjad Ali; Sharifullah Khan
Journal:  IET Syst Biol       Date:  2020-04       Impact factor: 1.615

  3 in total

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