Literature DB >> 21130424

A computational framework to quantify tissue microstructural integrity using conventional MRI macrostructural volumetry.

Indika S Walimuni1, Humaira Abid, Khader M Hasan.   

Abstract

In this work, we present a framework to fuse and quantify tissue microstructural attributes (e.g. diffusion, functional, relaxation and perfusion MRI) using high spatial resolution T1-weighted volumetric measurements. The proposed computational procedures can be implemented by utilizing advanced, image segmentation, registration and diffusion tensor image processing software. Feasibility of the framework is also demonstrated using in-house developed software and freely available software such as FreeSurfer for regional tissue segmentation, Advanced Normalization Tools (ANTs) for registration and DTIStudio for fiber tracking and diffusion tensor data processing. We also demonstrate the application of these methods in the provision of quality control measures to assess the fidelity of tissue segmentation and multi-modal MRI registration. 2010 Elsevier Ltd. All rights reserved.

Mesh:

Year:  2010        PMID: 21130424     DOI: 10.1016/j.compbiomed.2010.10.009

Source DB:  PubMed          Journal:  Comput Biol Med        ISSN: 0010-4825            Impact factor:   4.589


  5 in total

1.  Atlas-based investigation of human brain tissue microstructural spatial heterogeneity and interplay between transverse relaxation time and radial diffusivity.

Authors:  Indika S Walimuni; Khader M Hasan
Journal:  Neuroimage       Date:  2011-05-30       Impact factor: 6.556

2.  Registration of FA and T1-weighted MRI data of healthy human brain based on template matching and normalized cross-correlation.

Authors:  Milos Malinsky; Roman Peter; Erlend Hodneland; Astri J Lundervold; Arvid Lundervold; Jiri Jan
Journal:  J Digit Imaging       Date:  2013-08       Impact factor: 4.056

3.  Human brain iron mapping using atlas-based T2 relaxometry.

Authors:  Khader M Hasan; Indika S Walimuni; Larry A Kramer; Ponnada A Narayana
Journal:  Magn Reson Med       Date:  2011-06-23       Impact factor: 4.668

4.  Multi-modal quantitative MRI investigation of brain tissue neurodegeneration in multiple sclerosis.

Authors:  Khader M Hasan; Indika S Walimuni; Humaira Abid; Jerry S Wolinsky; Ponnada A Narayana
Journal:  J Magn Reson Imaging       Date:  2012-01-12       Impact factor: 4.813

5.  Multi-channel registration of fractional anisotropy and T1-weighted images in the presence of atrophy: application to multiple sclerosis.

Authors:  Eloy Roura; Torben Schneider; Marc Modat; Pankaj Daga; Nils Muhlert; Declan Chard; Sebastien Ourselin; Xavier Lladó; Claudia Gandini Wheeler-Kingshott
Journal:  Funct Neurol       Date:  2015 Oct-Dec
  5 in total

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