Literature DB >> 21118137

RNA-binding E3 ubiquitin ligases: novel players in nucleic acid regulation.

Florencia Cano1, Diego Miranda-Saavedra, Paul J Lehner.   

Abstract

Non-coding RNAs and their interaction with RNA-binding proteins regulate mRNA levels in key cellular processes. This has intensified interest in post-transcriptional regulation. Recent studies on the turnover of AU-rich cytokine mRNAs have linked mRNA metabolism with ubiquitination. Ubiquitin is well recognized for its role in protein regulation/degradation. In the present paper, we describe a new group of RNA-binding E3 ubiquitin ligases which are predicted to bind and regulate RNA stability. Although much effort has been focused on understanding the role of these proteins as key regulators of mRNA turnover, the requirement for E3 ligase activity in mRNA decay remains unclear. It is remarkable that the ubiquitin system is involved, either directly or indirectly, in both the degradation of nucleic acids as well as proteins. These new RNA-binding E3 ligases are potential candidates which link two important cellular regulatory pathways: the regulation of both protein and mRNA stability.

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Year:  2010        PMID: 21118137     DOI: 10.1042/BST0381621

Source DB:  PubMed          Journal:  Biochem Soc Trans        ISSN: 0300-5127            Impact factor:   5.407


  28 in total

1.  An Integrated Systems Biology Approach Identifies TRIM25 as a Key Determinant of Breast Cancer Metastasis.

Authors:  Logan A Walsh; Mariano J Alvarez; Erich Y Sabio; Marsha Reyngold; Vladimir Makarov; Suranjit Mukherjee; Ken-Wing Lee; Alexis Desrichard; Şevin Turcan; Martin G Dalin; Vinagolu K Rajasekhar; Shuibing Chen; Linda T Vahdat; Andrea Califano; Timothy A Chan
Journal:  Cell Rep       Date:  2017-08-15       Impact factor: 9.423

2.  Bam-dependent deubiquitinase complex can disrupt germ-line stem cell maintenance by targeting cyclin A.

Authors:  Shanming Ji; Chaoyi Li; Lin Hu; Kehui Liu; Jie Mei; Yuewan Luo; Yi Tao; Zongping Xia; Qinmiao Sun; Dahua Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-08       Impact factor: 11.205

3.  Ubiquitination-mediated interaction among domains is responsible for inhibition of RNA endonuclease activity of mRNA cycling sequence binding protein from L. donovani (LdCSBP).

Authors:  Kasturi Guha; Dipankar Bhandari; Titash Sen; Partha Saha
Journal:  Parasitol Res       Date:  2014-06-08       Impact factor: 2.289

4.  Efficient mRNA polyadenylation requires a ubiquitin-like domain, a zinc knuckle, and a RING finger domain, all contained in the Mpe1 protein.

Authors:  Susan D Lee; Claire L Moore
Journal:  Mol Cell Biol       Date:  2014-08-18       Impact factor: 4.272

5.  Scaffold function of long non-coding RNA HOTAIR in protein ubiquitination.

Authors:  Je-Hyun Yoon; Kotb Abdelmohsen; Jiyoung Kim; Xiaoling Yang; Jennifer L Martindale; Kumiko Tominaga-Yamanaka; Elizabeth J White; Arturo V Orjalo; John L Rinn; Stefan G Kreft; Gerald M Wilson; Myriam Gorospe
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

Review 6.  Signaling pathways that control mRNA turnover.

Authors:  Roopa Thapar; Andria P Denmon
Journal:  Cell Signal       Date:  2013-04-16       Impact factor: 4.315

7.  The RNA-binding protein repertoire of embryonic stem cells.

Authors:  S Chul Kwon; Hyerim Yi; Katrin Eichelbaum; Sophia Föhr; Bernd Fischer; Kwon Tae You; Alfredo Castello; Jeroen Krijgsveld; Matthias W Hentze; V Narry Kim
Journal:  Nat Struct Mol Biol       Date:  2013-08-04       Impact factor: 15.369

8.  Makorin ortholog LEP-2 regulates LIN-28 stability to promote the juvenile-to-adult transition in Caenorhabditis elegans.

Authors:  R Antonio Herrera; Karin Kiontke; David H A Fitch
Journal:  Development       Date:  2016-01-25       Impact factor: 6.868

Review 9.  Noncoding RNA and its associated proteins as regulatory elements of the immune system.

Authors:  Martin Turner; Alison Galloway; Elena Vigorito
Journal:  Nat Immunol       Date:  2014-06       Impact factor: 25.606

Review 10.  A novel post-transcriptional role for ubiquitin in the differential regulation of MHC class I allotypes.

Authors:  Florencia Cano; Paul J Lehner
Journal:  Mol Immunol       Date:  2012-11-07       Impact factor: 4.407

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