Literature DB >> 21113168

Optical trapping with high forces reveals unexpected behaviors of prion fibrils.

Jijun Dong1, Carlos E Castro, Mary C Boyce, Matthew J Lang, Susan Lindquist.   

Abstract

Amyloid fibrils are important in diverse cellular functions, feature in many human diseases and have potential applications in nanotechnology. Here we describe methods that combine optical trapping and fluorescent imaging to characterize the forces that govern the integrity of amyloid fibrils formed by a yeast prion protein. A crucial advance was to use the self-templating properties of amyloidogenic proteins to tether prion fibrils, enabling their manipulation in the optical trap. At normal pulling forces the fibrils were impervious to disruption. At much higher forces (up to 250 pN), discontinuities occurred in force-extension traces before fibril rupture. Experiments with selective amyloid-disrupting agents and mutations demonstrated that such discontinuities were caused by the unfolding of individual subdomains. Thus, our results reveal unusually strong noncovalent intermolecular contacts that maintain fibril integrity even when individual monomers partially unfold and extend fibril length.

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Year:  2010        PMID: 21113168      PMCID: PMC3274366          DOI: 10.1038/nsmb.1954

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  59 in total

Review 1.  Protein folding and misfolding.

Authors:  Christopher M Dobson
Journal:  Nature       Date:  2003-12-18       Impact factor: 49.962

Review 2.  Prions as adaptive conduits of memory and inheritance.

Authors:  James Shorter; Susan Lindquist
Journal:  Nat Rev Genet       Date:  2005-06       Impact factor: 53.242

3.  Optical trapping.

Authors:  Keir C Neuman; Steven M Block
Journal:  Rev Sci Instrum       Date:  2004-09       Impact factor: 1.523

4.  The structural basis of yeast prion strain variants.

Authors:  Brandon H Toyama; Mark J S Kelly; John D Gross; Jonathan S Weissman
Journal:  Nature       Date:  2007-09-02       Impact factor: 49.962

5.  Simulations of nucleation and elongation of amyloid fibrils.

Authors:  Jianing Zhang; M Muthukumar
Journal:  J Chem Phys       Date:  2009-01-21       Impact factor: 3.488

6.  Amyloid of the prion domain of Sup35p has an in-register parallel beta-sheet structure.

Authors:  Frank Shewmaker; Reed B Wickner; Robert Tycko
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-14       Impact factor: 11.205

7.  Branching in amyloid fibril growth.

Authors:  Christian Beyschau Andersen; Hisashi Yagi; Mauro Manno; Vincenzo Martorana; Tadato Ban; Gunna Christiansen; Daniel Erik Otzen; Yuji Goto; Christian Rischel
Journal:  Biophys J       Date:  2009-02-18       Impact factor: 4.033

8.  Direct and selective elimination of specific prions and amyloids by 4,5-dianilinophthalimide and analogs.

Authors:  Huan Wang; Martin L Duennwald; Blake E Roberts; Leslie M Rozeboom; Yingxin L Zhang; Andrew D Steele; Rajaraman Krishnan; Linhui Julie Su; Drees Griffin; Samrat Mukhopadhyay; Edward J Hennessy; Peter Weigele; Barbara J Blanchard; Jonathan King; Ashok A Deniz; Stephen L Buchwald; Vernon M Ingram; Susan Lindquist; James Shorter
Journal:  Proc Natl Acad Sci U S A       Date:  2008-05-14       Impact factor: 11.205

9.  Direct observation of chaperone-induced changes in a protein folding pathway.

Authors:  Philipp Bechtluft; Ruud G H van Leeuwen; Matthew Tyreman; Danuta Tomkiewicz; Nico Nouwen; Harald L Tepper; Arnold J M Driessen; Sander J Tans
Journal:  Science       Date:  2007-11-30       Impact factor: 47.728

10.  Hsp104-dependent remodeling of prion complexes mediates protein-only inheritance.

Authors:  Prasanna Satpute-Krishnan; Sara X Langseth; Tricia R Serio
Journal:  PLoS Biol       Date:  2007-02       Impact factor: 8.029

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  27 in total

1.  Direct observation of multiple misfolding pathways in a single prion protein molecule.

Authors:  Hao Yu; Xia Liu; Krishna Neupane; Amar Nath Gupta; Angela M Brigley; Allison Solanki; Iveta Sosova; Michael T Woodside
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-15       Impact factor: 11.205

2.  Single-molecule observation of helix staggering, sliding, and coiled coil misfolding.

Authors:  Zhiqun Xi; Ying Gao; George Sirinakis; Honglian Guo; Yongli Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-26       Impact factor: 11.205

3.  Optimal control of particle separation in inertial microfluidics.

Authors:  Christopher Prohm; Fredi Tröltzsch; Holger Stark
Journal:  Eur Phys J E Soft Matter       Date:  2013-10-25       Impact factor: 1.890

4.  Physical properties of polymorphic yeast prion amyloid fibers.

Authors:  Carlos E Castro; Jijun Dong; Mary C Boyce; Susan Lindquist; Matthew J Lang
Journal:  Biophys J       Date:  2011-07-20       Impact factor: 4.033

5.  Sensitive detection of aggregated prion protein via proximity ligation.

Authors:  Maria Hammond; Lotta Wik; Jean-Philippe Deslys; Emmanuel Comoy; Tommy Linné; Ulf Landegren; Masood Kamali-Moghaddam
Journal:  Prion       Date:  2014       Impact factor: 3.931

6.  Opposing effects of glutamine and asparagine govern prion formation by intrinsically disordered proteins.

Authors:  Randal Halfmann; Simon Alberti; Rajaraman Krishnan; Nicholas Lyle; Charles W O'Donnell; Oliver D King; Bonnie Berger; Rohit V Pappu; Susan Lindquist
Journal:  Mol Cell       Date:  2011-07-08       Impact factor: 17.970

7.  Single-molecule approaches to prion protein misfolding.

Authors:  Hao Yu; Derek R Dee; Michael T Woodside
Journal:  Prion       Date:  2013-01-28       Impact factor: 3.931

8.  Locating folds of the in-register parallel β-sheet of the Sup35p prion domain infectious amyloid.

Authors:  Anton Gorkovskiy; Kent R Thurber; Robert Tycko; Reed B Wickner
Journal:  Proc Natl Acad Sci U S A       Date:  2014-10-13       Impact factor: 11.205

Review 9.  Fibrillogenesis of huntingtin and other glutamine containing proteins.

Authors:  Yuri L Lyubchenko; Alexey V Krasnoslobodtsev; Sorin Luca
Journal:  Subcell Biochem       Date:  2012

10.  Non-targeted identification of prions and amyloid-forming proteins from yeast and mammalian cells.

Authors:  Dmitry Kryndushkin; Natalia Pripuzova; Barrington G Burnett; Frank Shewmaker
Journal:  J Biol Chem       Date:  2013-08-07       Impact factor: 5.157

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