Literature DB >> 21111076

DNA-mounted self-assembly: new approaches for genomic analysis and SNP detection.

Elena V Bichenkova1, Zhaolei Lang, Xuan Yu, Candelaria Rogert, Kenneth T Douglas.   

Abstract

This article presents an overview of new emerging approaches for nucleic acid detection via hybridization techniques that can potentially be applied to genomic analysis and SNP identification in clinical diagnostics. Despite the availability of a diverse variety of SNP genotyping technologies on the diagnostic market, none has truly succeeded in dominating its competitors thus far. Having been designed for specific diagnostic purposes or clinical applications, each of the existing bio-assay systems (briefly outlined here) is usually limited to a relatively narrow aspect or format of nucleic acid detection, and thus cannot entirely satisfy all the varieties of commercial requirements and clinical demands. This drives the diagnostic sector to pursue novel, cost-effective approaches to ensure rapid and reliable identification of pathogenic or hereditary human diseases. Hence, the purpose of this review is to highlight some new strategic directions in DNA detection technologies in order to inspire development of novel molecular diagnostic tools and bio-assay systems with superior reliability, reproducibility, robustness, accuracy and sensitivity at lower assay cost. One approach to improving the sensitivity of an assay to confidently discriminate between single point mutations is based on the use of target assembled, split-probe systems, which constitutes the main focus of this review.
Copyright © 2010 Elsevier B.V. All rights reserved.

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Year:  2010        PMID: 21111076     DOI: 10.1016/j.bbagrm.2010.11.002

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  4 in total

1.  Characterization of 40 single nucleotide polymorphism (SNP) via Tm-shift assay in the mud crab (Scylla paramamosain).

Authors:  Nana Feng; Hongyu Ma; Chunyan Ma; Zhen Xu; Shujuan Li; Wei Jiang; Yuexing Liu; Lingbo Ma
Journal:  Mol Biol Rep       Date:  2014-05-28       Impact factor: 2.316

2.  Synonymous SNPs of viral genes facilitate virus to escape host antiviral RNAi immunity.

Authors:  Yuechao Sun; Yu Zhang; Xiaobo Zhang
Journal:  RNA Biol       Date:  2019-08-30       Impact factor: 4.652

3.  Rapid Naked-Eye Discrimination of Cytochrome P450 Genetic Polymorphism through Non-Crosslinking Aggregation of DNA-Functionalized Gold Nanoparticles.

Authors:  Yoshitsugu Akiyama; Guoqing Wang; Shota Shiraishi; Naoki Kanayama; Tohru Takarada; Mizuo Maeda
Journal:  ChemistryOpen       Date:  2016-11-23       Impact factor: 2.911

4.  Development of a graphene oxide-based assay for the sequence-specific detection of double-stranded DNA molecules.

Authors:  Anna Maria Giuliodori; Anna Brandi; Shivaram Kotla; Francesco Perrozzi; Roberto Gunnella; Luca Ottaviano; Roberto Spurio; Attilio Fabbretti
Journal:  PLoS One       Date:  2017-08-29       Impact factor: 3.240

  4 in total

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