Literature DB >> 21109484

Accuracy to 2nd International HIV-1 RNA WHO Standard: assessment of three generations of quantitative HIV-1 RNA nucleic acid amplification tests.

Joachim Glaubitz1, Dorothea Sizmann, Christian O Simon, Konstanze S Hoffmann, Daniel Drogan, Martin Hesse, Gabriele Lang, Michael Kroeh, Pascale Simmler, Manuela Dewald, Gerd Haberhausen, Andreas Lindauer, Kurt Beyser, Achim Reber, Andreja Baumeister, Eva Wolf, Hans Jaeger, Reiner Babiel.   

Abstract

BACKGROUND: Standardization of quantitative HIV-1 tests to a global primary standard is required by regulatory authorities to ensure comparability of test results across different assays and platforms of different manufacturers. OBJECTIVES AND STUDY
DESIGN: Three generations of quantitative HIV-1 tests, the COBAS(®) AMPLICOR(®) HIV-1 Monitor Test, v1.5 (HIV-1 Monitor test v1.5); the COBAS(®) AmpliPrep/COBAS(®) TaqMan(®) HIV-1 Test (HIV-1 TaqMan(®) test v1.0); and the dual-target-based COBAS(®) AmpliPrep/COBAS(®) TaqMan(®) HIV-1 Test, v2.0 (HIV-1 TaqMan(®) test v2.0), were assessed for accuracy to World Health Organization (WHO) 2nd International Standard for human immunodeficiency virus 1 (HIV-1) RNA (NIBSC code 97/650) at concentration levels below 1667 IU/mL including relevant medical decision points.
RESULTS: With the 2nd WHO Standard the mean difference across all concentrations was -0.07 log(10) for the HIV-1 Monitor test v1.5; +0.12 log(10) for the HIV-1 TaqMan(®) test v1.0; and +0.09 log(10) for the HIV-1 TaqMan(®) test v2.0. Linearity, including concentrations below the claimed limit of quantitation, was demonstrated for HIV-1 TaqMan(®) test v2.0. The HIV-1 TaqMan(®) test v1.0 showed a trend towards higher quantitation at very low concentration levels and the HIV-1 Monitor test v1.5 had a tendency towards lower quantitation at low concentration levels.
CONCLUSIONS: All three assays are closely traceable to the primary WHO HIV-1 RNA standard for in vitro diagnostic IVD assays. Compared to the other two assays, the HIV-1 TaqMan(®) test v2.0 showed better linearity around the limit of detection and below.
Copyright © 2010 Elsevier B.V. All rights reserved.

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Year:  2010        PMID: 21109484     DOI: 10.1016/j.jcv.2010.10.017

Source DB:  PubMed          Journal:  J Clin Virol        ISSN: 1386-6532            Impact factor:   3.168


  7 in total

1.  Improved estimation of the distribution of suppressed plasma HIV-1 RNA in men receiving effective antiretroviral therapy.

Authors:  Michael F Schneider; Joseph B Margolick; Lisa P Jacobson; Susheel Reddy; Otoniel Martinez-Maza; Alvaro Muñoz
Journal:  J Acquir Immune Defic Syndr       Date:  2012-04-01       Impact factor: 3.731

2.  Ability of two commercially available assays (Abbott RealTime HIV-1 and Roche Cobas AmpliPrep/Cobas TaqMan HIV-1 Version 2.0) to quantify low HIV-1 RNA Levels (<1,000 copies/milliliter): comparison with clinical samples and NIBSC working reagent for nucleic acid testing assays.

Authors:  Alessandra Amendola; Patrizia Marsella; Maria Bloisi; Federica Forbici; Claudio Angeletti; Maria R Capobianchi
Journal:  J Clin Microbiol       Date:  2014-03-26       Impact factor: 5.948

3.  Cross-platform analysis of HIV-1 RNA data generated by a multicenter assay validation study with wide geographic representation.

Authors:  Cheryl Jennings; Brian Harty; Suzanne Granger; Carrie Wager; John A Crump; Susan A Fiscus; James W Bremer
Journal:  J Clin Microbiol       Date:  2012-06-12       Impact factor: 5.948

Review 4.  Considerations for accurate gene expression measurement by reverse transcription quantitative PCR when analysing clinical samples.

Authors:  Rebecca Sanders; Deborah J Mason; Carole A Foy; Jim F Huggett
Journal:  Anal Bioanal Chem       Date:  2014-05-25       Impact factor: 4.142

5.  Use of reverse-transcriptase-based HIV-1 viral load assessment to confirm low viral loads in newly diagnosed patients in Switzerland.

Authors:  Beatrice N Vetter; Cyril Shah; Jon B Huder; Jürg Böni; Jörg Schüpbach
Journal:  BMC Infect Dis       Date:  2014-02-13       Impact factor: 3.090

6.  Factors contributing to salivary human immunodeficiency virus type-1 levels measured by a Poisson distribution-based PCR method.

Authors:  Ryo Ikeno; Eiko Yamada; Sayaka Yamazaki; Tomoyuki Ueda; Masaki Nagata; Ritsuo Takagi; Shingo Kato
Journal:  J Int Med Res       Date:  2017-11-09       Impact factor: 1.671

Review 7.  Laboratory diagnosis of viral infection.

Authors:  David R Peaper; Marie Louise Landry
Journal:  Handb Clin Neurol       Date:  2014
  7 in total

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