| Literature DB >> 21108778 |
Matthias Imöhl1, Ralf René Reinert, Christina Mutscher, Mark van der Linden.
Abstract
BACKGROUND: Macrolide resistant Streptococcus pneumoniae has been on a gradual increase in Germany for over a decade. The current study was undertaken against the background of the recent observation of declining macrolide resistance rates especially among German children. Nationwide surveillance of invasive pneumococcal disease has been conducted in Germany since 1992. A population- and laboratory-based approach was used to collect data on invasive pneumococcal disease, and isolates sent to the National Reference Center for Streptococci by diagnostic microbiological laboratories from 1992 to 2008 were included in this study.Entities:
Mesh:
Substances:
Year: 2010 PMID: 21108778 PMCID: PMC3001718 DOI: 10.1186/1471-2180-10-299
Source DB: PubMed Journal: BMC Microbiol ISSN: 1471-2180 Impact factor: 3.605
Ranking of serotype specific macrolide nonsusceptibility among IPD isolates in Germany from 1992 to 2008 (n, overall = 11,807; n, adults = 8,834; n, children = 2,973)
| children | adults | overall | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14 | 0.0 | 67.4 | 32.6 | 663 | 0.2 | 71.0 | 28.8 | 883 | 0.1 | 69.5 | 30.4 | 1546 | 16.4 |
| 45 | - | - | - | - | 0.0 | 33.3 | 66.7 | 3 | 0.0 | 33.3 | 66.7 | 3 | 0.0 |
| 19B | 0.0 | 0.0 | 100.0 | 1 | 0.0 | 50.0 | 50.0 | 2 | 0.0 | 33.3 | 66.7 | 3 | 0.0 |
| rough | 0.0 | 25.0 | 75.0 | 8 | 0.0 | 40.0 | 60.0 | 10 | 0.0 | 33.3 | 66.7 | 18 | 0.2 |
| 6B | 0.0 | 29.3 | 70.7 | 215 | 0.4 | 36.2 | 63.4 | 232 | 0.2 | 32.9 | 66.9 | 447 | 4.8 |
| 15A | 4.8 | 28.6 | 66.7 | 21 | 0.0 | 33.3 | 66.7 | 27 | 2.1 | 31.3 | 66.7 | 48 | 0.5 |
| 19F | 0.0 | 24.5 | 75.5 | 212 | 0.4 | 27.5 | 72.0 | 236 | 0.2 | 26.1 | 73.7 | 448 | 4.8 |
| 19A | 0.0 | 24.4 | 75.6 | 90 | 0.9 | 26.0 | 73.2 | 231 | 0.6 | 25.5 | 73.8 | 321 | 3.4 |
| 10B | - | - | - | - | 0.0 | 20.0 | 80.0 | 10 | 0.0 | 20.0 | 80.0 | 10 | 0.1 |
| 19C | 0.0 | 0.0 | 100.0 | 2 | 0.0 | 33.3 | 66.7 | 3 | 0.0 | 20.0 | 80.0 | 5 | 0.1 |
| 15B | 0.0 | 23.1 | 76.9 | 26 | 0.0 | 17.5 | 82.5 | 57 | 0.0 | 19.3 | 80.7 | 83 | 0.9 |
| 23F | 0.5 | 20.4 | 79.1 | 201 | 0.6 | 18.3 | 81.2 | 356 | 0.5 | 19.0 | 80.4 | 557 | 5.9 |
| 9V | 0.9 | 13.2 | 85.8 | 106 | 1.3 | 20.1 | 78.5 | 298 | 1.2 | 18.3 | 80.4 | 404 | 4.3 |
| NT | 0.0 | 10.0 | 90.0 | 10 | 0.0 | 20.7 | 79.3 | 29 | 0.0 | 17.9 | 82.1 | 39 | 0.4 |
| 11F | - | - | - | - | 0.0 | 16.7 | 83.3 | 6 | 0.0 | 16.7 | 83.3 | 6 | 0.1 |
| 15C | 0.0 | 15.4 | 84.6 | 26 | 0.0 | 14.8 | 85.2 | 27 | 0.0 | 15.1 | 84.9 | 53 | 0.6 |
| 9A | 0.0 | 9.5 | 90.5 | 21 | 0.0 | 19.2 | 80.8 | 26 | 0.0 | 14.9 | 85.1 | 47 | 0.5 |
| 33B | 0.0 | 0.0 | 100.0 | 3 | 0.0 | 25.0 | 75.0 | 4 | 0.0 | 14.3 | 85.7 | 7 | 0.1 |
| 33A | 0.0 | 11.1 | 88.9 | 9 | 0.0 | 14.3 | 85.7 | 21 | 0.0 | 13.3 | 86.7 | 30 | 0.3 |
| 33F | 0.0 | 0.0 | 100.0 | 17 | 0.0 | 17.6 | 82.4 | 51 | 0.0 | 13.2 | 86.8 | 68 | 0.7 |
| 12B | 0.0 | 0.0 | 100.0 | 3 | 0.0 | 20.0 | 80.0 | 5 | 0.0 | 12.5 | 87.5 | 8 | 0.1 |
| 6A | 0.0 | 5.5 | 94.5 | 128 | 0.4 | 9.7 | 89.9 | 277 | 0.2 | 8.4 | 91.4 | 405 | 4.3 |
| 28A | 0.0 | 0.0 | 100.0 | 4 | 0.0 | 12.5 | 87.5 | 8 | 0.0 | 8.3 | 91.7 | 12 | 0.1 |
| 35F | 0.0 | 10.0 | 90.0 | 10 | 0.0 | 7.8 | 92.2 | 64 | 0.0 | 8.1 | 91.9 | 74 | 0.8 |
| 24F | 0.0 | 6.8 | 93.2 | 44 | 0.0 | 6.9 | 93.1 | 72 | 0.0 | 6.9 | 93.1 | 116 | 1.2 |
| 13 | 0.0 | 0.0 | 100.0 | 3 | 0.0 | 8.3 | 91.7 | 12 | 0.0 | 6.7 | 93.3 | 15 | 0.2 |
| 16F | 0.0 | 0.0 | 100.0 | 7 | 3.7 | 7.4 | 88.9 | 27 | 2.9 | 5.9 | 91.2 | 34 | 0.4 |
| 17F | 0.0 | 12.5 | 87.5 | 8 | 0.0 | 3.2 | 96.8 | 31 | 0.0 | 5.1 | 94.9 | 39 | 0.4 |
| 38 | 0.0 | 0.0 | 100.0 | 23 | 0.0 | 7.9 | 92.1 | 38 | 0.0 | 4.9 | 95.1 | 61 | 0.6 |
| 34 | 0.0 | 16.7 | 83.3 | 6 | 0.0 | 0.0 | 100.0 | 15 | 0.0 | 4.8 | 95.2 | 21 | 0.2 |
| 9N | 0.0 | 0.0 | 100.0 | 25 | 0.0 | 5.5 | 94.5 | 145 | 0.0 | 4.7 | 95.3 | 170 | 1.8 |
| 11A | 0.0 | 0.0 | 100.0 | 15 | 0.0 | 5.2 | 94.8 | 135 | 0.0 | 4.7 | 95.3 | 150 | 1.6 |
| 18A | 0.0 | 0.0 | 100.0 | 10 | 0.0 | 8.3 | 91.7 | 12 | 0.0 | 4.5 | 95.5 | 22 | 0.2 |
| 1 | 0.4 | 5.2 | 94.4 | 232 | 0.2 | 3.5 | 96.3 | 458 | 0.3 | 4.1 | 95.7 | 690 | 7.3 |
| 7F | 0.0 | 3.9 | 96.1 | 203 | 0.4 | 3.7 | 95.9 | 515 | 0.3 | 3.8 | 96.0 | 718 | 7.6 |
| 5 | 0.0 | 0.0 | 100.0 | 19 | 0.0 | 5.4 | 94.6 | 37 | 0.0 | 3.6 | 96.4 | 56 | 0.6 |
| 10A | 0.0 | 4.0 | 96.0 | 50 | 0.0 | 2.5 | 97.5 | 122 | 0.0 | 2.9 | 97.1 | 172 | 1.8 |
| 4 | 0.0 | 2.9 | 97.1 | 102 | 0.0 | 2.2 | 97.8 | 409 | 0.0 | 2.3 | 97.7 | 511 | 5.4 |
| 20 | 0.0 | 0.0 | 100.0 | 5 | 0.0 | 2.6 | 97.4 | 38 | 0.0 | 2.3 | 97.7 | 43 | 0.5 |
| 18C | 0.6 | 1.7 | 97.8 | 181 | 0.0 | 2.8 | 97.2 | 145 | 0.3 | 2.1 | 97.5 | 326 | 3.5 |
| 3 | 0.0 | 3.1 | 96.9 | 96 | 0.2 | 1.8 | 98.0 | 663 | 0.1 | 2.0 | 97.9 | 759 | 8.1 |
| 12F | 0.0 | 0.0 | 100.0 | 16 | 0.0 | 1.9 | 98.1 | 105 | 0.0 | 1.7 | 98.3 | 121 | 1.3 |
| 8 | 0.0 | 0.0 | 100.0 | 18 | 0.5 | 1.6 | 97.9 | 190 | 0.5 | 1.4 | 98.1 | 208 | 2.2 |
| 23A | 0.0 | 0.0 | 100.0 | 14 | 0.0 | 1.4 | 98.6 | 74 | 0.0 | 1.1 | 98.9 | 88 | 0.9 |
| 22F | 0.0 | 0.0 | 100.0 | 20 | 0.5 | 0.5 | 98.9 | 186 | 0.5 | 0.5 | 99.0 | 206 | 2.2 |
| 2 | 0.0 | 0.0 | 100.0 | 1 | 0.0 | 0.0 | 100.0 | 11 | 0.0 | 0.0 | 100.0 | 12 | 0.1 |
| 31 | 0.0 | 0.0 | 100.0 | 1 | 0.0 | 0.0 | 100.0 | 25 | 0.0 | 0.0 | 100.0 | 26 | 0.3 |
| 12A | 0.0 | 0.0 | 100.0 | 3 | 0.0 | 0.0 | 100.0 | 9 | 0.0 | 0.0 | 100.0 | 12 | 0.1 |
| 18F | 0.0 | 0.0 | 100.0 | 5 | 0.0 | 0.0 | 100.0 | 10 | 0.0 | 0.0 | 100.0 | 15 | 0.2 |
| 23B | 0.0 | 0.0 | 100.0 | 6 | 0.0 | 0.0 | 100.0 | 11 | 0.0 | 0.0 | 100.0 | 17 | 0.2 |
| 35B | 0.0 | 0.0 | 100.0 | 3 | 0.0 | 0.0 | 100.0 | 8 | 0.0 | 0.0 | 100.0 | 11 | 0.1 |
| 9L | 0.0 | 0.0 | 100.0 | 5 | 0.0 | 0.0 | 100.0 | 12 | 0.0 | 0.0 | 100.0 | 17 | 0.2 |
| Others* | 0.0 | 0.0 | 100.0 | 31 | 0.0 | 0.0 | 100.0 | 62 | 0.0 | 0.0 | 100.0 | 93 | 1.0 |
| not serotyped | 0.0 | 4.4 | 95.6 | 45 | 0.2 | 0.0 | 99.8 | 2360 | 0.2 | 0.1 | 99.8 | 2405 | - |
| total (%) | 0.2 | 23.8 | 76.1 | - | 0.3 | 13.4 | 86.3 | - | 0.2 | 16.0 | 83.7 | - | 100.0 |
| total (n) | 5 | 707 | 2261 | 2973 | 24 | 1184 | 7626 | 8834 | 29 | 1891 | 9887 | 11807 | 9402 |
I%, intermediate isolates in percent; R%, resistant isolates in percent; S%, susceptible isolates in percent; n, number of isolates tested.
Total (n)† represents the number of isolates collected from both children and adults. Total (%)‡ represents the serotype distribution in percent in relation to the number of 9402 IPD isolates serotyped.
Others* includes the serotypes (number of isolates, overall): 15F (9), 18B (9), 7C (8), 10F (6), 11B (6), 35A (6), 29 (5), 21 (4), 24A (4), 28F (4), 35C (4), 37 (4), 22A (3), 36 (3), 7A (3), 24B (2), 25F (2), 39 (2), 48 (2), 7B (2), 17A (1), 18 (1), 19 (1), 35 (1), 9 (1).
Ranking of macrolide nonsusceptibility among IPD isolates in Germany from 1992 to 2008 related to the sampling source (n = 11,807)
| Sampling source | I% | R% | I+R% | total |
|---|---|---|---|---|
| Pharynx | 0.0 | 75.0 | 4 | |
| Pericard | 0.0 | 50.0 | 8 | |
| Mastoid | 0.0 | 40.0 | 10 | |
| BAL | 0.6 | 18.7 | 154 | |
| Others/unknown | 0.0 | 18.3 | 131 | |
| CSF | 0.2 | 17.7 | 1824 | |
| Blood | 0.3 | 15.6 | 9352 | |
| Pleural fluid | 0.4 | 14.7 | 252 | |
| Eye | 0.0 | 11.1 | 9 | |
| Ascites | 0.0 | 8.7 | 23 | |
| Joint | 0.0 | 5.6 | 36 | |
| Ear | 0.0 | 0.0 | 4 | |
Serotype distribution among IPD isolates from different sampling sites in Germany from 1992 to 2008 in percent (n = 11,807)
| Sero | Ascites | BAL | Blood | CSF | Joint | Pleural | Total | Total |
|---|---|---|---|---|---|---|---|---|
| 14 | 9,1 | 10,7 | 17,4 | 14,8 | 0,0 | 11,0 | 16,5 | 1546 |
| 3 | 0,0 | 6,0 | 8,6 | 5,7 | 3,0 | 13,8 | 8,1 | 759 |
| 7F | 4,5 | 1,2 | 8,0 | 7,2 | 0,0 | 7,2 | 7,7 | 718 |
| 1 | 4,5 | 6,0 | 8,3 | 2,6 | 12,1 | 15,5 | 7,4 | 690 |
| 23F | 4,5 | 8,3 | 5,7 | 7,1 | 3,0 | 6,6 | 5,9 | 557 |
| 4 | 4,5 | 7,1 | 6,0 | 3,8 | 6,1 | 3,9 | 5,5 | 511 |
| 19F | 9,1 | 7,1 | 4,2 | 6,8 | 3,0 | 3,9 | 4,8 | 448 |
| 6B | 9,1 | 6,0 | 4,3 | 6,6 | 12,1 | 4,4 | 4,8 | 447 |
| 6A | 4,5 | 2,4 | 4,0 | 5,7 | 12,1 | 4,4 | 4,3 | 405 |
| 9V | 0,0 | 4,8 | 4,8 | 2,3 | 6,1 | 2,8 | 4,3 | 404 |
| 18C | 4,5 | 3,6 | 2,8 | 5,8 | 9,1 | 3,3 | 3,5 | 326 |
| 19A | 4,5 | 4,8 | 3,5 | 2,7 | 3,0 | 1,7 | 3,4 | 321 |
| 8 | 9,1 | 1,2 | 2,4 | 2,0 | 0,0 | 0,6 | 2,2 | 208 |
| 22F | 0,0 | 0,0 | 2,3 | 2,0 | 6,1 | 0,6 | 2,2 | 206 |
| 10A | 4,5 | 1,2 | 1,6 | 2,7 | 3,0 | 1,7 | 1,8 | 172 |
| 9N | 0,0 | 2,4 | 1,9 | 1,7 | 0,0 | 1,1 | 1,8 | 170 |
| 11A | 0,0 | 1,2 | 1,6 | 1,7 | 0,0 | 2,8 | 1,6 | 150 |
| 12F | 4,5 | 2,4 | 1,3 | 1,2 | 0,0 | 0,6 | 1,3 | 121 |
| 24F | 0,0 | 0,0 | 1,2 | 1,6 | 0,0 | 0,6 | 1,2 | 116 |
| 23A | 0,0 | 1,2 | 0,8 | 1,2 | 0,0 | 2,8 | 0,9 | 88 |
| 15B | 0,0 | 0,0 | 0,7 | 1,5 | 3,0 | 1,7 | 0,9 | 83 |
| 35F | 4,5 | 0,0 | 0,7 | 1,0 | 0,0 | 1,7 | 0,8 | 74 |
| 33F | 0,0 | 1,2 | 0,6 | 1,2 | 3,0 | 0,6 | 0,7 | 68 |
| 38 | 0,0 | 0,0 | 0,6 | 0,8 | 0,0 | 0,0 | 0,7 | 61 |
| 5 | 0,0 | 0,0 | 0,7 | 0,3 | 0,0 | 0,6 | 0,6 | 56 |
| 15C | 4,5 | 1,2 | 0,5 | 0,7 | 3,0 | 0,0 | 0,6 | 53 |
| 15A | 0,0 | 0,0 | 0,5 | 0,7 | 0,0 | 1,1 | 0,5 | 48 |
| 9A | 0,0 | 1,2 | 0,5 | 0,4 | 0,0 | 1,1 | 0,5 | 47 |
| 20 | 0,0 | 0,0 | 0,4 | 0,5 | 0,0 | 1,1 | 0,5 | 43 |
| 17F | 4,5 | 3,6 | 0,3 | 0,6 | 0,0 | 0,0 | 0,4 | 39 |
| NT | 0,0 | 2,4 | 0,4 | 0,3 | 3,0 | 0,0 | 0,4 | 39 |
| 16F | 0,0 | 0,0 | 0,3 | 0,6 | 0,0 | 0,6 | 0,4 | 34 |
| 33A | 0,0 | 0,0 | 0,3 | 0,4 | 0,0 | 0,6 | 0,3 | 30 |
| 31 | 0,0 | 2,4 | 0,3 | 0,2 | 0,0 | 0,0 | 0,3 | 26 |
| 18A | 0,0 | 0,0 | 0,2 | 0,4 | 3,0 | 0,0 | 0,2 | 22 |
| 34 | 0,0 | 0,0 | 0,1 | 0,6 | 0,0 | 0,6 | 0,2 | 21 |
| Others* | 9,1 | 10,7 | 2,3 | 4,5 | 6,1 | 1,7 | 2,8 | 264 |
| Total | 100,0 | 100,0 | 100,0 | 100,0 | 100,0 | 100,0 | 100,0 | 9371 |
| not serotyped | 4,3 | 45,5 | 23,8 | 2,1 | 8,3 | 28,2 | 20,6 | 2436 |
Only sampling sites with ≥ 20 isolates were included in this table.
NT: nontypeable; n: number of isolates tested.
Others* includes the serotypes (number of isolates): rough (18), 9L (17), 23B (17), 13 (15), 18F (15), 12A (12), 2 (12), 28A (12), 35B (11), 10B (10), 15F (9), 18B (9), 12B (8), 33B (7), 7C (6), 10F (6), 11B (6), 11F (6), 35A (6), 7A (5), 19C (5), 29 (5), 21 (4), 24A (4), 28F (4), 35C (4), 37 (4), 19B (3), 22A (3), 36 (3), 45 (3), 7B (2), 24B (2), 25F (2), 39 (2), 48 (2), 9(1), 17A (1), 18 (1), 19 (1), 35 (1).
Figure 1Macrolide nonsusceptibilities of IPD isolates in Germany. Macrolide nonsusceptibilities of IPD isolates in Germany (1992 to 2008; n, total = 11,807; n, adults = 8,834; n, children = 2,973; I%, intermediate in percent; R%, resistant in percent; n, number of cases).
Figure 2Minimum inhibitory concentrations (MICs) of invasive isolates. Minimum inhibitory concentrations (MICs) of invasive isolates (1992-2008, n = 11,807)
Figure 3Serotype specific macrolide nonsusceptibility of IPD isolates in Germany. Serotype specific macrolide nonsusceptibility of IPD isolates in Germany (1992 to 2008; n, serotype 14 = 1,546; n, serotype 6B = 447; n, serotype 19F = 448; n, serotype 19A = 321; n, serotype 9V = 404; n, serotype 23F = 557)
Figure 4Macrolide nonsusceptibility among 7-, 10- and 13-valent vaccine serotypes. Macrolide nonsusceptibility among 7-, 10- and 13-valent vaccine serotypes (IPD isolates in Germany from 1992 to 2008; n, number of cases. Vaccine strains included are: 7-valent: serotypes 4, 6B, 9V, 14, 18C, 19F and 23F; 10-valent: 7-valent serotypes plus 1, 5 and 7F; 13-valent: 10-valent serotypes plus 3, 19A and 6A)
Figure 5Macrolide nonsusceptibility among non 7-, non 10- and non 13-valent vaccine serotypes. Macrolide nonsusceptibility among non 7-, non 10- and non 13-valent vaccine serotypes (IPD isolates in Germany from 1992 to 2008; n, number of cases)