Literature DB >> 21107349

Meta-analysis confirms the LCE3C_LCE3B deletion as a risk factor for psoriasis in several ethnic groups and finds interaction with HLA-Cw6.

Eva Riveira-Munoz1, Su-Min He, Georgia Escaramís, Philip E Stuart, Ulrike Hüffmeier, Catherine Lee, Brian Kirby, Akira Oka, Emiliano Giardina, Wilson Liao, Judith Bergboer, Kati Kainu, Rafael de Cid, Batmunkh Munkhbat, Patrick L J M Zeeuwen, John A L Armour, Annie Poon, Tomotaka Mabuchi, Akira Ozawa, Agnieszka Zawirska, A David Burden, Jonathan N Barker, Francesca Capon, Heiko Traupe, Liang-Dan Sun, Yong Cui, Xian-Yong Yin, Gang Chen, Henry W Lim, Rajan P Nair, John J Voorhees, Trilokraj Tejasvi, Ramón Pujol, Namid Munkhtuvshin, Judith Fischer, Juha Kere, Joost Schalkwijk, Anne Bowcock, Pui-Yan Kwok, Giuseppe Novelli, Hidetoshi Inoko, Anthony W Ryan, Richard C Trembath, André Reis, Xue-Jun Zhang, James T Elder, Xavier Estivill.   

Abstract

A multicenter meta-analysis including data from 9,389 psoriasis patients and 9,477 control subjects was performed to investigate the contribution of the deletion of genes LCE3C and LCE3B, involved in skin barrier defense, to psoriasis susceptibility in different populations. The study confirms that the deletion of LCE3C and LCE3B is a common genetic factor for susceptibility to psoriasis in the European populations (OR(Overall) = 1.21 (1.15-1.27)), and for the first time directly demonstrates the deletion's association with psoriasis in the Chinese (OR = 1.27 (1.16-1.34)) and Mongolian (OR = 2.08 (1.44-2.99)) populations. The analysis of the HLA-Cw6 locus showed significant differences in the epistatic interaction with the LCE3C and LCE3B deletion in at least some European populations, indicating epistatic effects between these two major genetic contributors to psoriasis. The study highlights the value of examining genetic risk factors in multiple populations to identify genetic interactions, and indicates the need of further studies to understand the interaction of the skin barrier and the immune system in susceptibility to psoriasis.

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Year:  2010        PMID: 21107349      PMCID: PMC3386316          DOI: 10.1038/jid.2010.350

Source DB:  PubMed          Journal:  J Invest Dermatol        ISSN: 0022-202X            Impact factor:   8.551


  15 in total

Review 1.  Psoriasis.

Authors:  Frank O Nestle; Daniel H Kaplan; Jonathan Barker
Journal:  N Engl J Med       Date:  2009-07-30       Impact factor: 91.245

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Journal:  Ann Intern Med       Date:  1997-11-01       Impact factor: 25.391

3.  Sequence and haplotype analysis supports HLA-C as the psoriasis susceptibility 1 gene.

Authors:  Rajan P Nair; Philip E Stuart; Ioana Nistor; Ravi Hiremagalore; Nicholas V C Chia; Stefan Jenisch; Michael Weichenthal; Gonçalo R Abecasis; Henry W Lim; Enno Christophers; John J Voorhees; James T Elder
Journal:  Am J Hum Genet       Date:  2006-03-31       Impact factor: 11.025

Review 4.  The genetics of psoriasis and autoimmunity.

Authors:  Anne M Bowcock
Journal:  Annu Rev Genomics Hum Genet       Date:  2005       Impact factor: 8.929

5.  Psoriasis genome-wide association study identifies susceptibility variants within LCE gene cluster at 1q21.

Authors:  Xue-Jun Zhang; Wei Huang; Sen Yang; Liang-Dan Sun; Feng-Yu Zhang; Qi-Xing Zhu; Fu-Ren Zhang; Chi Zhang; Wen-Hui Du; Xiong-Ming Pu; Hui Li; Feng-Li Xiao; Zai-Xing Wang; Yong Cui; Fei Hao; Jie Zheng; Xue-Qin Yang; Hui Cheng; Chun-Di He; Xiao-Ming Liu; Li-Min Xu; Hou-Feng Zheng; Shu-Mei Zhang; Jian-Zhong Zhang; Hong-Yan Wang; Yi-Lin Cheng; Bi-Hua Ji; Qiao-Yun Fang; Yu-Zhen Li; Fu-Sheng Zhou; Jian-Wen Han; Cheng Quan; Bin Chen; Jun-Lin Liu; Da Lin; Li Fan; An-Ping Zhang; Sheng-Xiu Liu; Chun-Jun Yang; Pei-Guang Wang; Wen-Ming Zhou; Guo-Shu Lin; Wei-Dong Wu; Xing Fan; Min Gao; Bao-Qi Yang; Wen-Sheng Lu; Zheng Zhang; Kun-Ju Zhu; Song-Ke Shen; Min Li; Xiao-Yan Zhang; Ting-Ting Cao; Wei Ren; Xin Zhang; Jun He; Xian-Fa Tang; Shun Lu; Jian-Qiang Yang; Lin Zhang; Dan-Ni Wang; Feng Yuan; Xian-Yong Yin; Hong-Jie Huang; Hai-Feng Wang; Xin-Yi Lin; Jian-Jun Liu
Journal:  Nat Genet       Date:  2009-01-25       Impact factor: 38.330

6.  Deletion of the late cornified envelope LCE3B and LCE3C genes as a susceptibility factor for psoriasis.

Authors:  Rafael de Cid; Eva Riveira-Munoz; Patrick L J M Zeeuwen; Jason Robarge; Wilson Liao; Emma N Dannhauser; Emiliano Giardina; Philip E Stuart; Rajan Nair; Cynthia Helms; Georgia Escaramís; Ester Ballana; Gemma Martín-Ezquerra; Martin den Heijer; Marijke Kamsteeg; Irma Joosten; Evan E Eichler; Conxi Lázaro; Ramón M Pujol; Lluís Armengol; Gonçalo Abecasis; James T Elder; Giuseppe Novelli; John A L Armour; Pui-Yan Kwok; Anne Bowcock; Joost Schalkwijk; Xavier Estivill
Journal:  Nat Genet       Date:  2009-01-25       Impact factor: 38.330

7.  Coding haplotype analysis supports HCR as the putative susceptibility gene for psoriasis at the MHC PSORS1 locus.

Authors:  Kati Asumalahti; Colin Veal; Tarja Laitinen; Sari Suomela; Michael Allen; Outi Elomaa; Michael Moser; Rafael de Cid; Samuli Ripatti; Igor Vorechovsky; Jan A Marcusson; Hidemi Nakagawa; Conxi Lazaro; Xavier Estivill; Francesca Capon; Giuseppe Novelli; Ulpu Saarialho-Kere; Jonathan Barker; Richard Trembath; Juha Kere
Journal:  Hum Mol Genet       Date:  2002-03-01       Impact factor: 6.150

8.  Variants in linkage disequilibrium with the late cornified envelope gene cluster deletion are associated with susceptibility to psoriatic arthritis.

Authors:  John Bowes; Edward Flynn; Pauline Ho; Batool Aly; Ann W Morgan; Helena Marzo-Ortega; Laura Coates; Ross McManus; Anthony W Ryan; David Kane; Eleanor Korendowych; Neil McHugh; Oliver FitzGerald; Jonathan Packham; Ian N Bruce; Anne Barton
Journal:  Ann Rheum Dis       Date:  2010-07-19       Impact factor: 19.103

9.  Fine mapping of the psoriasis susceptibility locus PSORS1 supports HLA-C as the susceptibility gene in the Han Chinese population.

Authors:  Xing Fan; Sen Yang; Wei Huang; Zhi-Min Wang; Liang-Dan Sun; Yan-Hua Liang; Min Gao; Yue-Qing Ren; Kai-Yue Zhang; Wen-Hui Du; Yu-Jun Shen; Jian-Jun Liu; Xue-Jun Zhang
Journal:  PLoS Genet       Date:  2008-03-21       Impact factor: 5.917

10.  Heterogeneity in meta-analyses of genome-wide association investigations.

Authors:  John P A Ioannidis; Nikolaos A Patsopoulos; Evangelos Evangelou
Journal:  PLoS One       Date:  2007-09-05       Impact factor: 3.240

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  35 in total

Review 1.  Genetics of susceptibility and treatment response in psoriatic arthritis.

Authors:  Darren D O'Rielly; Proton Rahman
Journal:  Nat Rev Rheumatol       Date:  2011-11-08       Impact factor: 20.543

2.  Psoriasis in skin of color: epidemiology, genetics, clinical presentation, and treatment nuances.

Authors:  Andrew F Alexis; Paul Blackcloud
Journal:  J Clin Aesthet Dermatol       Date:  2014-11

3.  Genome-wide association study of copy number variations (CNVs) with opioid dependence.

Authors:  Dawei Li; Hongyu Zhao; Henry R Kranzler; Ming D Li; Kevin P Jensen; Tetyana Zayats; Lindsay A Farrer; Joel Gelernter
Journal:  Neuropsychopharmacology       Date:  2014-09-27       Impact factor: 7.853

4.  Deletion of late cornified envelope genes, LCE3C_LCE3B-del, is not associated with psoriatic arthritis in Tunisian patients.

Authors:  Bouchlaka Souissi Chiraz; Ammar Myriam; Zarra Ines; Jordan Catherine; Bouazizi Fatma; Cheour Ilhem; Tekaya Raoudha; Zeglaoui Hela; Fourati Hela; Bouajina Elyes; Doss Nejib; Helms Cindy; Elgaaied Amel; Sellami Slaheddine
Journal:  Mol Biol Rep       Date:  2014-02-25       Impact factor: 2.316

5.  Genotypic variability-based genome-wide association study identifies non-additive loci HLA-C and IL12B for psoriasis.

Authors:  Wen-Hua Wei; Jonathan Massey; Jane Worthington; Anne Barton; Richard B Warren
Journal:  J Hum Genet       Date:  2017-12-19       Impact factor: 3.172

6.  Genome-wide Association Analysis of Psoriatic Arthritis and Cutaneous Psoriasis Reveals Differences in Their Genetic Architecture.

Authors:  Philip E Stuart; Rajan P Nair; Lam C Tsoi; Trilokraj Tejasvi; Sayantan Das; Hyun Min Kang; Eva Ellinghaus; Vinod Chandran; Kristina Callis-Duffin; Robert Ike; Yanming Li; Xiaoquan Wen; Charlotta Enerbäck; Johann E Gudjonsson; Sulev Kõks; Külli Kingo; Tõnu Esko; Ulrich Mrowietz; Andre Reis; H Erich Wichmann; Christian Gieger; Per Hoffmann; Markus M Nöthen; Juliane Winkelmann; Manfred Kunz; Elvia G Moreta; Philip J Mease; Christopher T Ritchlin; Anne M Bowcock; Gerald G Krueger; Henry W Lim; Stephan Weidinger; Michael Weichenthal; John J Voorhees; Proton Rahman; Peter K Gregersen; Andre Franke; Dafna D Gladman; Gonçalo R Abecasis; James T Elder
Journal:  Am J Hum Genet       Date:  2015-11-28       Impact factor: 11.025

Review 7.  Recent evolution of the human skin barrier.

Authors:  Erin A Brettmann; Cristina de Guzman Strong
Journal:  Exp Dermatol       Date:  2018-06-28       Impact factor: 3.960

8.  Psoriasis risk genes of the late cornified envelope-3 group are distinctly expressed compared with genes of other LCE groups.

Authors:  Judith G M Bergboer; Geuranne S Tjabringa; Marijke Kamsteeg; Ivonne M J J van Vlijmen-Willems; Diana Rodijk-Olthuis; Patrick A M Jansen; Jean-Yves Thuret; Masashi Narita; Akemi Ishida-Yamamoto; Patrick L J M Zeeuwen; Joost Schalkwijk
Journal:  Am J Pathol       Date:  2011-04       Impact factor: 4.307

9.  Gene-Gene Interaction between LCE and CLEC16A Increases the Risk of Psoriasis in a Chinese Population.

Authors:  Jianbo Wang; Yantao Ding; Xing Fan; Xianbo Zuo; Wen Wang; Hui Cheng; Ping Li; Liangdan Sun; Sen Yang; Xuejun Zhang
Journal:  Ann Dermatol       Date:  2014-06-12       Impact factor: 1.444

Review 10.  Current and potential immune therapies and vaccines in the management of psoriasis.

Authors:  Benjamin H Kaffenberger; Grace L Lee; Kelly Tyler; Derek V Chan; Wael Jarjour; Maria E Ariza; Marshall V Williams; Henry K Wong
Journal:  Hum Vaccin Immunother       Date:  2014-02-03       Impact factor: 3.452

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