Literature DB >> 21106800

Evidence of a recombinant wild-type human astrovirus strain from a Kenyan child with gastroenteritis.

Marianne Wolfaardt1, Nicholas M Kiulia, Jason M Mwenda, Maureen B Taylor.   

Abstract

A human astrovirus (HAstV) strain from Kenya was characterized by nucleotide sequence analysis. Sequences from open reading frame 1a (ORF1a) clustered with genotype 6/7, those from ORF1b clustered with genotype 3, and those from ORF2 clustered with genotype 2. A recombination point in the ORF1b-ORF2 junction was identified, with a second possible recombination point within the ORF1a region.

Entities:  

Mesh：

Substances：

Year:  2010        PMID： 21106800      PMCID： PMC3043485          DOI： 10.1128/JCM.01093-10

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  26 in total

Review 1.  Evolutionary aspects of recombination in RNA viruses.

Authors:  Michael Worobey; Edward C Holmes
Journal:  J Gen Virol       Date:  1999-10       Impact factor: 3.891

2.  Characterisation of a novel recombination event in the norovirus polymerase gene.

Authors:  Allison Waters; Suzie Coughlan; William W Hall
Journal:  Virology       Date:  2007-04-16       Impact factor: 3.616

3.  Norovirus recombination.

Authors:  Rowena A Bull; Mark M Tanaka; Peter A White
Journal:  J Gen Virol       Date:  2007-12       Impact factor: 3.891

4.  MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0.

Authors:  Koichiro Tamura; Joel Dudley; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2007-05-07       Impact factor: 16.240

5.  Complete genome sequence of a highly divergent astrovirus isolated from a child with acute diarrhea.

Authors:  Stacy R Finkbeiner; Carl D Kirkwood; David Wang
Journal:  Virol J       Date:  2008-10-14       Impact factor: 4.099

6.  Multiple novel astrovirus species in human stool.

Authors:  A Kapoor; L Li; J Victoria; B Oderinde; C Mason; P Pandey; S Z Zaidi; E Delwart
Journal:  J Gen Virol       Date:  2009-08-19       Impact factor: 3.891

7.  Identification of a novel astrovirus (astrovirus VA1) associated with an outbreak of acute gastroenteritis.

Authors:  Stacy R Finkbeiner; Yan Li; Susan Ruone; Christina Conrardy; Nicole Gregoricus; Denise Toney; Herbert W Virgin; Larry J Anderson; Jan Vinjé; David Wang; Suxiang Tong
Journal:  J Virol       Date:  2009-08-12       Impact factor: 5.103

8.  Genetic analysis of the hypervariable region of the human astrovirus nsP1a coding region: design of a new RFLP typing method.

Authors:  Susana Guix; Santiago Caballero; Cristina Fuentes; Albert Bosch; Rosa M Pintó
Journal:  J Med Virol       Date:  2008-02       Impact factor: 2.327

Review 9.  Human sapoviruses: genetic diversity, recombination, and classification.

Authors:  Grant S Hansman; Tomoichiro Oka; Kazuhiko Katayama; Naokazu Takeda
Journal:  Rev Med Virol       Date:  2007 Mar-Apr       Impact factor: 6.989

10.  New respiratory enterovirus and recombinant rhinoviruses among circulating picornaviruses.

Authors:  Caroline Tapparel; Thomas Junier; Daniel Gerlach; Sandra Van-Belle; Lara Turin; Samuel Cordey; Kathrin Mühlemann; Nicolas Regamey; John-David Aubert; Paola M Soccal; Philippe Eigenmann; Evgeny Zdobnov; Laurent Kaiser
Journal:  Emerg Infect Dis       Date:  2009-05       Impact factor: 6.883
View more
  18 in total

1.  Novel human astroviruses: challenges for developing countries.

Authors:  Triveni Krishnan
Journal:  Virusdisease       Date:  2014-02-21

2.  Genetic heterogeneity and recombination in human type 2 astroviruses.

Authors:  S De Grazia; M C Medici; P Pinto; P Moschidou; F Tummolo; A Calderaro; F Bonura; K Banyai; G M Giammanco; V Martella
Journal:  J Clin Microbiol       Date:  2012-08-29       Impact factor: 5.948

Review 3.  Human astroviruses.

Authors:  Albert Bosch; Rosa M Pintó; Susana Guix
Journal:  Clin Microbiol Rev       Date:  2014-10       Impact factor: 26.132

4.  The fecal virome of pigs on a high-density farm.

Authors:  Tongling Shan; Linlin Li; Peter Simmonds; Chunlin Wang; Adam Moeser; Eric Delwart
Journal:  J Virol       Date:  2011-09-07       Impact factor: 5.103

5.  Identification and characterization of unrecognized viruses in stool samples of non-polio acute flaccid paralysis children by simplified VIDISCA.

Authors:  Shahzad Shaukat; Mehar Angez; Muhammad Masroor Alam; Maarten F Jebbink; Martin Deijs; Marta Canuti; Salmaan Sharif; Michel de Vries; Adnan Khurshid; Tariq Mahmood; Lia van der Hoek; Syed Sohail Zahoor Zaidi
Journal:  Virol J       Date:  2014-08-12       Impact factor: 4.099

Review 6.  The Broad Host Range and Genetic Diversity of Mammalian and Avian Astroviruses.

Authors:  Celeste Donato; Dhanasekaran Vijaykrishna
Journal:  Viruses       Date:  2017-05-10       Impact factor: 5.048

Review 7.  Bat Astroviruses: Towards Understanding the Transmission Dynamics of a Neglected Virus Family.

Authors:  Kerstin Fischer; Vinícius Pinho Dos Reis; Anne Balkema-Buschmann
Journal:  Viruses       Date:  2017-02-21       Impact factor: 5.048

Review 8.  Intra- and Cross-Species Transmission of Astroviruses.

Authors:  Shanley N Roach; Ryan A Langlois
Journal:  Viruses       Date:  2021-06-11       Impact factor: 5.048

9.  Identification and manipulation of the molecular determinants influencing poliovirus recombination.

Authors:  Charles Runckel; Oscar Westesson; Raul Andino; Joseph L DeRisi
Journal:  PLoS Pathog       Date:  2013-02-07       Impact factor: 6.823

10.  Next-generation amplicon sequencing identifies genetically diverse human astroviruses, including recombinant strains, in environmental waters.

Authors:  Akihiko Hata; Masaaki Kitajima; Eiji Haramoto; Suntae Lee; Masaru Ihara; Charles P Gerba; Hiroaki Tanaka
Journal:  Sci Rep       Date:  2018-08-07       Impact factor: 4.379
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.