Literature DB >> 21106797

PCR diagnosis of invasive candidiasis: systematic review and meta-analysis.

Tomer Avni1, Leonard Leibovici, Mical Paul.   

Abstract

Invasive candidiasis (IC) is a significant cause of morbidity and mortality. Diagnosis relies on culture-based methods, which lack sensitivity and delay diagnosis. We conducted a systematic review assessing the diagnostic accuracy of PCR-based methods to detect Candida spp. directly in blood samples. We searched electronic databases for prospective or retrospective cohort and case-control studies. Two reviewers abstracted data independently. Meta-analysis was performed using a hierarchical logistic regression model. Random-effects metaregression was performed to assess the effects of study methods and infection characteristics on sensitivity or specificity values. We included 54 studies with 4,694 patients, 963 of whom had proven/probable or possible IC. Perfect (100%) sensitivity and specificity for PCR in whole-blood samples was observed when patients with cases had candidemia and controls were healthy people. When PCR was performed to evaluate patients with suspected invasive candidiasis, the pooled sensitivity for the diagnosis of candidemia was 0.95 (confidence interval, 0.88 to 0.98) and the pooled specificity was 0.92 (0.88 to 0.95). A specificity of >90% was maintained in several analyses considering different control groups. The use of whole-blood samples, rRNA, or P450 gene targets and a PCR detection limit of ≤ 10 CFU/ml were associated with improved test performance. PCR positivity rates among patients with proven or probable IC were 85% (78 to 91%), while blood cultures were positive for 38% (29 to 46%). We conclude that direct PCR using blood samples had good sensitivity and specificity for the diagnosis of IC and offers an attractive method for early diagnosis of specific Candida spp. Its effects on clinical outcomes should be investigated.

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Year:  2010        PMID: 21106797      PMCID: PMC3043518          DOI: 10.1128/JCM.01602-10

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  76 in total

1.  Time to initiation of fluconazole therapy impacts mortality in patients with candidemia: a multi-institutional study.

Authors:  Kevin W Garey; Milind Rege; Manjunath P Pai; Dana E Mingo; Katie J Suda; Robin S Turpin; David T Bearden
Journal:  Clin Infect Dis       Date:  2006-05-16       Impact factor: 9.079

2.  A unification of models for meta-analysis of diagnostic accuracy studies.

Authors:  Roger M Harbord; Jonathan J Deeks; Matthias Egger; Penny Whiting; Jonathan A C Sterne
Journal:  Biostatistics       Date:  2006-05-11       Impact factor: 5.899

3.  Polymerase chain reaction screening for fungemia and/or invasive fungal infections in patients with hematologic malignancies.

Authors:  Patrícia Ribeiro; Fátima Costa; Alexandra Monteiro; Joana Caldas; Madalena Silva; Gilda Ferreira; Joana Veiga; Manuel O Sousa; Maria P Viegas; Ester Santos; António J Gonçalves; Aida B Sousa
Journal:  Support Care Cancer       Date:  2006-01-25       Impact factor: 3.603

4.  Multiplex real-time PCR targeting the RNase P RNA gene for detection and identification of Candida species in blood.

Authors:  Asa Innings; Måns Ullberg; Anders Johansson; Carl Johan Rubin; Niklas Noreus; Magnus Isaksson; Björn Herrmann
Journal:  J Clin Microbiol       Date:  2007-01-10       Impact factor: 5.948

5.  Incidence, risk factors, and predictors of outcome of candidemia. Survey in 2 Italian university hospitals.

Authors:  Matteo Bassetti; Enrico Maria Trecarichi; Elda Righi; Maurizio Sanguinetti; Francesca Bisio; Brunella Posteraro; Ornella Soro; Roberto Cauda; Claudio Viscoli; Mario Tumbarello
Journal:  Diagn Microbiol Infect Dis       Date:  2007-03-09       Impact factor: 2.803

6.  Molecular detection and identification of Candida and Aspergillus spp. from clinical samples using real-time PCR.

Authors:  L Klingspor; S Jalal
Journal:  Clin Microbiol Infect       Date:  2006-08       Impact factor: 8.067

7.  Adequacy of empirical antifungal therapy and effect on outcome among patients with invasive Candida species infections.

Authors:  Michael D Parkins; Deana M Sabuda; Sameer Elsayed; Kevin B Laupland
Journal:  J Antimicrob Chemother       Date:  2007-06-18       Impact factor: 5.790

8.  Biofilm production by Candida species and inadequate antifungal therapy as predictors of mortality for patients with candidemia.

Authors:  Mario Tumbarello; Brunella Posteraro; Enrico Maria Trecarichi; Barbara Fiori; Marianna Rossi; Rosaria Porta; Katleen de Gaetano Donati; Marilena La Sorda; Teresa Spanu; Giovanni Fadda; Roberto Cauda; Maurizio Sanguinetti
Journal:  J Clin Microbiol       Date:  2007-04-25       Impact factor: 5.948

9.  Invasive fungal infection in renal transplant recipients demonstrated by panfungal polymerase chain reaction.

Authors:  Parisa Badiee; Parivash Kordbacheh; Abdolvahab Alborzi; Seyed Ali Malekhoseini
Journal:  Exp Clin Transplant       Date:  2007-06       Impact factor: 0.945

10.  Candiduria in critically ill patients: an early candidemia marker when coupled with multiple blood specimens PCR assays?

Authors:  G Dimopoulos; A Velegraki; A Pefanis; A Karabinis
Journal:  Hepatogastroenterology       Date:  2007-03
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  87 in total

Review 1.  Polymerase chain reaction-based assays for the diagnosis of invasive fungal infections.

Authors:  Themistoklis K Kourkoumpetis; Beth Burgwyn Fuchs; Jeffrey J Coleman; Athanasios Desalermos; Eleftherios Mylonakis
Journal:  Clin Infect Dis       Date:  2012-02-23       Impact factor: 9.079

2.  [Not Available].

Authors:  Jf Arnould; R Le Floch
Journal:  Ann Burns Fire Disasters       Date:  2015-03-31

Review 3.  Better tests, better care: improved diagnostics for infectious diseases.

Authors:  Angela M Caliendo; David N Gilbert; Christine C Ginocchio; Kimberly E Hanson; Larissa May; Thomas C Quinn; Fred C Tenover; David Alland; Anne J Blaschke; Robert A Bonomo; Karen C Carroll; Mary Jane Ferraro; Lisa R Hirschhorn; W Patrick Joseph; Tobi Karchmer; Ann T MacIntyre; L Barth Reller; Audrey F Jackson
Journal:  Clin Infect Dis       Date:  2013-12       Impact factor: 9.079

4.  Appropriate Treatment of Invasive Candidiasis in ICU: Timing, Colonization Index, Candida Score & Biomarkers, Towards de-Escalation?

Authors:  Francesco Giuseppe De Rosa; Silvia Corcione; Giorgia Montrucchio; Luca Brazzi; Giovanni Di Perri
Journal:  Turk J Anaesthesiol Reanim       Date:  2016-12-01

Review 5.  Invasive Candida Infections in the ICU: Diagnosis and Therapy.

Authors:  Péter Hankovszky; Domokos Társy; Nándor Öveges; Zsolt Molnár
Journal:  J Crit Care Med (Targu Mures)       Date:  2015-11-10

Review 6.  Updates in Laboratory Diagnostics for Invasive Fungal Infections.

Authors:  David Terrero-Salcedo; Margaret V Powers-Fletcher
Journal:  J Clin Microbiol       Date:  2020-05-26       Impact factor: 5.948

7.  Quantitation of Candida CFU in initial positive blood cultures.

Authors:  Christopher D Pfeiffer; Gregory P Samsa; Wiley A Schell; L Barth Reller; John R Perfect; Barbara D Alexander
Journal:  J Clin Microbiol       Date:  2011-06-15       Impact factor: 5.948

8.  Mortality associated with candidemia in non-neutropenic cancer patients is not less compared to a neutropenic cohort of cancer patients.

Authors:  G Goel; M Chandy; A Bhattacharyya; S Banerjee; S Chatterjee; S Mullick; S Sinha; K Sengupta; K Dhar; S Bhattacharya; S Rudramurthy; A Chakrabarti
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2017-08-11       Impact factor: 3.267

9.  Investigating the presence of fungal agents in febrile neutropenic patients using different microbiological, serological, and molecular methods.

Authors:  Ahu Sönmez; Fahriye Eksi; Mustafa Pehlivan; Handan Haydaroglu Sahin
Journal:  Bosn J Basic Med Sci       Date:  2015-07-27       Impact factor: 3.363

10.  Fungal infection in cerebrospinal fluid from some patients with multiple sclerosis.

Authors:  D Pisa; R Alonso; F J Jiménez-Jiménez; L Carrasco
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2013-01-16       Impact factor: 3.267

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