Literature DB >> 21099283

Expression and function of Set7/9 in pancreatic islets.

Takeshi Ogihara1, Nathan L Vanderford, Bernhard Maier, Roland W Stein, Raghavendra G Mirmira.   

Abstract

Histone tail acetylation and methylation are known to enhance accessibility of islet genes to transcription factors and the basal transcriptional machinery.  In this brief report, we follow up on a recent study in which we identified the islet enriched factor Set7/9 as a potentially important histone methyltransferase in β-cells (Deering, et al. Diabetes 2009; 58:185-93).  We had suggested that the methylation of H3-Lys4 by Set7/9 enhances accessibility of the insulin gene to the basal transcriptional machinery.  Consistent with this hypothesis, we show here that RNA polymerase II occupancy at the insulin and IAPP genes is considerably enhanced in β-cells compared to α cells (or NIH3T3 cells), and that the converse is true for RNA polymerase II occupancy at the glucagon gene. The enrichment of Set7/9 in β-cells appears to be dependent upon Pdx1, as knockdown of Pdx1 in INS-1 β-cells using small hairpin RNAs almost completely abolishes Set7/9 expression.  A LacZ expression vector driven by the -6.5 kilobase pair Set7/9 promoter that contains putative Pdx1 binding sites shows β-cell-line-specific expression.  Taken together, our data support further the hypothesis that Pdx1-dependent Set7/9 expression may be crucial to enhancing chromatin accessibility and transcription of β-cell genes.

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Year:  2009        PMID: 21099283      PMCID: PMC3617574          DOI: 10.4161/isl.1.3.9779

Source DB:  PubMed          Journal:  Islets        ISSN: 1938-2014            Impact factor:   2.694


  14 in total

1.  Quantitative assessment of gene targeting in vitro and in vivo by the pancreatic transcription factor, Pdx1. Importance of chromatin structure in directing promoter binding.

Authors:  Swarup K Chakrabarti; Joshua C James; Raghavendra G Mirmira
Journal:  J Biol Chem       Date:  2002-02-01       Impact factor: 5.157

2.  Pdx-1 links histone H3-Lys-4 methylation to RNA polymerase II elongation during activation of insulin transcription.

Authors:  Joshua Francis; Swarup K Chakrabarti; James C Garmey; Raghavendra G Mirmira
Journal:  J Biol Chem       Date:  2005-09-01       Impact factor: 5.157

3.  Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome.

Authors:  Nathaniel D Heintzman; Rhona K Stuart; Gary Hon; Yutao Fu; Christina W Ching; R David Hawkins; Leah O Barrera; Sara Van Calcar; Chunxu Qu; Keith A Ching; Wei Wang; Zhiping Weng; Roland D Green; Gregory E Crawford; Bing Ren
Journal:  Nat Genet       Date:  2007-02-04       Impact factor: 38.330

4.  Insulin gene transcription is mediated by interactions between the p300 coactivator and PDX-1, BETA2, and E47.

Authors:  Yi Qiu; Min Guo; Suming Huang; Roland Stein
Journal:  Mol Cell Biol       Date:  2002-01       Impact factor: 4.272

5.  Overexpression of the coactivator bridge-1 results in insulin deficiency and diabetes.

Authors:  Jamie L Volinic; Jee H Lee; Kazuhiro Eto; Varinderpal Kaur; Melissa K Thomas
Journal:  Mol Endocrinol       Date:  2005-08-11

6.  Transitions in distinct histone H3 methylation patterns at the heterochromatin domain boundaries.

Authors:  C D Allis; S I Grewal
Journal:  Science       Date:  2001-08-10       Impact factor: 47.728

7.  Histone H3 lysine 4 dimethylation signals the transcriptional competence of the adiponectin promoter in preadipocytes.

Authors:  Melina M Musri; Helena Corominola; Roser Casamitjana; Ramon Gomis; Marcelina Párrizas
Journal:  J Biol Chem       Date:  2006-04-13       Impact factor: 5.157

8.  Mechanism of insulin gene regulation by the pancreatic transcription factor Pdx-1: application of pre-mRNA analysis and chromatin immunoprecipitation to assess formation of functional transcriptional complexes.

Authors:  Tessy Iype; Joshua Francis; James C Garmey; Jonathan C Schisler; Rafael Nesher; Gordon C Weir; Thomas C Becker; Christopher B Newgard; Steven C Griffen; Raghavendra G Mirmira
Journal:  J Biol Chem       Date:  2005-03-02       Impact factor: 5.157

9.  Histone H3 lysine 4 methylation is mediated by Set1 and promotes maintenance of active chromatin states in fission yeast.

Authors:  Ken-ichi Noma; Shiv I S Grewal
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-22       Impact factor: 11.205

10.  Glucose regulation of insulin gene expression requires the recruitment of p300 by the beta-cell-specific transcription factor Pdx-1.

Authors:  Amber L Mosley; John A Corbett; Sabire Ozcan
Journal:  Mol Endocrinol       Date:  2004-05-27
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  11 in total

Review 1.  Lineage determinants in early endocrine development.

Authors:  Sebastian Rieck; Eric D Bankaitis; Christopher V E Wright
Journal:  Semin Cell Dev Biol       Date:  2012-06-21       Impact factor: 7.727

2.  Context-specific α- to-β-cell reprogramming by forced Pdx1 expression.

Authors:  Yu-Ping Yang; Fabrizio Thorel; Daniel F Boyer; Pedro L Herrera; Christopher V E Wright
Journal:  Genes Dev       Date:  2011-08-15       Impact factor: 11.361

3.  SET7/9 Enzyme Regulates Cytokine-induced Expression of Inducible Nitric-oxide Synthase through Methylation of Lysine 4 at Histone 3 in the Islet β Cell.

Authors:  Kyoko Fujimaki; Takeshi Ogihara; David L Morris; Hisanobu Oda; Hitoshi Iida; Yoshio Fujitani; Raghavendra G Mirmira; Carmella Evans-Molina; Hirotaka Watada
Journal:  J Biol Chem       Date:  2015-05-20       Impact factor: 5.157

Review 4.  Chromatin modifications associated with diabetes.

Authors:  Samuel T Keating; Assam El-Osta
Journal:  J Cardiovasc Transl Res       Date:  2012-05-26       Impact factor: 4.132

5.  The Ldb1 transcriptional co-regulator is required for establishment and maintenance of the pancreatic endocrine lineage.

Authors:  Eliana Toren; Yanping Liu; Maigen Bethea; Alexa Wade; Chad S Hunter
Journal:  FASEB J       Date:  2022-08       Impact factor: 5.834

6.  Coordinate changes in histone modifications, mRNA levels, and metabolite profiles in clonal INS-1 832/13 β-cells accompany functional adaptations to lipotoxicity.

Authors:  Siri Malmgren; Peter Spégel; Anders P H Danielsson; Cecilia L Nagorny; Lotta E Andersson; Marloes Dekker Nitert; Martin Ridderstråle; Hindrik Mulder; Charlotte Ling
Journal:  J Biol Chem       Date:  2013-03-08       Impact factor: 5.157

7.  Thioredoxin-interacting protein promotes islet amyloid polypeptide expression through miR-124a and FoxA2.

Authors:  Gu Jing; Clara Westwell-Roper; Junqin Chen; Guanlan Xu; C Bruce Verchere; Anath Shalev
Journal:  J Biol Chem       Date:  2014-03-13       Impact factor: 5.157

8.  ISL-1 promotes pancreatic islet cell proliferation by forming an ISL-1/Set7/9/PDX-1 complex.

Authors:  Zhe Yang; Qiao Zhang; Qin Lu; Zhuqing Jia; Ping Chen; Kangtao Ma; Weiping Wang; Chunyan Zhou
Journal:  Cell Cycle       Date:  2015       Impact factor: 4.534

9.  MLL3 and MLL4 Methyltransferases Bind to the MAFA and MAFB Transcription Factors to Regulate Islet β-Cell Function.

Authors:  David W Scoville; Holly A Cyphert; Lan Liao; Jianming Xu; Al Reynolds; Shuangli Guo; Roland Stein
Journal:  Diabetes       Date:  2015-07-15       Impact factor: 9.461

10.  The Lysine Demethylase KDM5B Regulates Islet Function and Glucose Homeostasis.

Authors:  Marie Balslev Backe; Chunyu Jin; Luz Andreone; Aditya Sankar; Karl Agger; Kristian Helin; Andreas Nygaard Madsen; Steen Seier Poulsen; Madhusudhan Bysani; Karl Bacos; Charlotte Ling; Marcelo Javier Perone; Birgitte Holst; Thomas Mandrup-Poulsen
Journal:  J Diabetes Res       Date:  2019-07-28       Impact factor: 4.011

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