Literature DB >> 21099088

Genotyping and phylogenetic analysis of the major genes in respiratory syncytial virus isolated from infants with bronchiolitis.

Kazuko Goto-Sugai1, Hiroyuki Tsukagoshi, Katsumi Mizuta, Shunji Matsuda, Masahiro Noda, Toshiyuki Sugai, Yoshihiro Saito, Nobuhiko Okabe, Masato Tashiro, Kunihisa Kozawa, Ryota Tanaka, Yukio Morita, Atsuyoshi Nishina, Hirokazu Kimura.   

Abstract

We performed the genotyping and phylogenetic analysis of respiratory syncytial virus (RSV) isolated from 17 infants with bronchiolitis in Kanagawa Prefecture, Japan in 2005 and 2006. The major genes in these samples (attachment [G] glycoprotein gene, fusion [F] protein gene, and nucleoprotein [N] gene) were sequenced and analyzed genetically. Phylogenetic analysis of these genes revealed that 7 and 10 strains could be classified into subgroups A and B, respectively. Phylogenetic analysis of the G gene revealed that the subgroup A and B strains were unique genotypes GA2 and BA, respectively. Moreover, the amino acid sequences for these genotypes suggested a relatively high frequency of amino acid substitutions in the G and F proteins in these strains, whereas the N protein was highly homologous. These results suggest that RSV genotypes GA2 and BA may be associated with bronchiolitis in the cases studied here.

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Year:  2010        PMID： 21099088

Source DB:  PubMed          Journal:  Jpn J Infect Dis        ISSN： 1344-6304            Impact factor:   1.362


  10 in total

1.  Development of a luciferase immunoprecipitation system assay to detect IgG antibodies against human respiratory syncytial virus nucleoprotein.

Authors:  Sangeeta Kumari; Roberta Lynne Crim; Ashwin Kulkarni; Susette A Audet; Thembi Mdluli; Haruhiko Murata; Judy A Beeler
Journal:  Clin Vaccine Immunol       Date:  2014-01-08

2.  A molecular epidemiological study of respiratory viruses detected in Japanese children with acute wheezing illness.

Authors:  Asako Fujitsuka; Hiroyuki Tsukagoshi; Mika Arakawa; Kazuko Goto-Sugai; Akihide Ryo; Yoshimichi Okayama; Katsumi Mizuta; Atsuyoshi Nishina; Masakazu Yoshizumi; Yoichi Kaburagi; Masahiro Noda; Masato Tashiro; Nobuhiko Okabe; Masaaki Mori; Shumpei Yokota; Hirokazu Kimura
Journal:  BMC Infect Dis       Date:  2011-06-10       Impact factor: 3.090

3.  Circulating strains of human respiratory syncytial virus in central and south America.

Authors:  Merly Sovero; Josefina Garcia; Tadeusz Kochel; V Alberto Laguna-Torres; Jorge Gomez; Wilson Chicaiza; Melvin Barrantes; Felix Sanchez; Mirna Jimenez; Guillermo Comach; Ivette Lorenzana de Rivera; Ana E Arango; Roberto Agudo; Eric S Halsey
Journal:  PLoS One       Date:  2011-08-01       Impact factor: 3.240

4.  Molecular characterization of circulating respiratory syncytial virus (RSV) genotypes in Gilgit Baltistan Province of Pakistan during 2011-2012 winter season.

Authors:  Uzma Bashir; Uzma Bashir Aamir; Muhammad Masroor Alam; Hajra Sadia; Syed Sohail Zahoor Zaidi; Birjees Mazher Kazi
Journal:  PLoS One       Date:  2013-09-13       Impact factor: 3.240

5.  Molecular epidemiology and phylodynamics of the human respiratory syncytial virus fusion protein in northern Taiwan.

Authors:  Hsin Chi; Hsin-Fu Liu; Li-Chuan Weng; Nai-Yu Wang; Nan-Chang Chiu; Mei-Ju Lai; Yung-Cheng Lin; Yu-Ying Chiu; Wen-Shyang Hsieh; Li-Min Huang
Journal:  PLoS One       Date:  2013-05-29       Impact factor: 3.240

6.  Epidemiology of respiratory syncytial virus in children in Cyprus during three consecutive winter seasons (2010-2013): age distribution, seasonality and association between prevalent genotypes and disease severity.

Authors:  C Panayiotou; J Richter; M Koliou; N Kalogirou; E Georgiou; C Christodoulou
Journal:  Epidemiol Infect       Date:  2014-01-24       Impact factor: 4.434

Review 7.  Molecular epidemiology of respiratory viruses in virus-induced asthma.

Authors:  Hiroyuki Tsukagoshi; Taisei Ishioka; Masahiro Noda; Kunihisa Kozawa; Hirokazu Kimura
Journal:  Front Microbiol       Date:  2013-09-12       Impact factor: 5.640

8.  Epidemiological changes of respiratory syncytial virus (RSV) infections in Israel.

Authors:  Shira Hirsh; Musa Hindiyeh; Liat Kolet; Liora Regev; Hilda Sherbany; Karnit Yaary; Ella Mendelson; Michal Mandelboim
Journal:  PLoS One       Date:  2014-03-03       Impact factor: 3.240

9.  Epidemiology and Molecular Characterization of Human Respiratory Syncytial Virus in Senegal after Four Consecutive Years of Surveillance, 2012-2015.

Authors:  Amary Fall; Ndongo Dia; El Hadj Abdel Kader Cisse; Davy E Kiori; Fatoumata Diene Sarr; Sara Sy; Debora Goudiaby; Vincent Richard; Mbayame Ndiaye Niang
Journal:  PLoS One       Date:  2016-06-17       Impact factor: 3.240

10.  Are respiratory viruses involved in preseasonal symptoms or severity in Japanese cedar pollinosis?

Authors:  Hirokuni Otsuka; Hiroyuki Tsukagoshi; Hirokazu Kimura; Ikuo Takanashi; Kimihiro Okubo
Journal:  Allergy Rhinol (Providence)       Date:  2016-01
  10 in total

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