Literature DB >> 21093474

Temporal and functional analysis of DNA replicated in early S phase.

David G Kaufman1, Stephanie M Cohen, Paul D Chastain.   

Abstract

In summary, recently developed technologies have begun to draw back the curtain of mystery that obscures some of the basic mechanisms of DNA replication at multiple levels. Studies using extended DNA and chromatin fiber techniques have proven valuable for identifying the location of origins of replication at specific genomic sites and determining their temporal order of replication, for identifying and quantifying sites of DNA damage and localizing chromatin proteins in relation to sites of DNA replication. The future potential of these methods include further discoveries in functional genomics and contributions to the elucidation of the histone code. Such studies could prove very valuable in studies of the mechanisms of cancer development, aging, and other processes of disordered genomic functioning.

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Year:  2010        PMID: 21093474      PMCID: PMC3079056          DOI: 10.1016/j.advenzreg.2010.11.004

Source DB:  PubMed          Journal:  Adv Enzyme Regul        ISSN: 0065-2571


  56 in total

1.  Histone acetylation regulates the time of replication origin firing.

Authors:  Maria Vogelauer; Liudmilla Rubbi; Isabelle Lucas; Bonita J Brewer; Michael Grunstein
Journal:  Mol Cell       Date:  2002-11       Impact factor: 17.970

2.  Visualization of altered replication dynamics after DNA damage in human cells.

Authors:  Catherine J Merrick; Dean Jackson; John F X Diffley
Journal:  J Biol Chem       Date:  2004-02-23       Impact factor: 5.157

3.  Excess MCM proteins protect human cells from replicative stress by licensing backup origins of replication.

Authors:  Arkaitz Ibarra; Etienne Schwob; Juan Méndez
Journal:  Proc Natl Acad Sci U S A       Date:  2008-06-25       Impact factor: 11.205

4.  Temporal differences in DNA replication during the S phase using single fiber analysis of normal human fibroblasts and glioblastoma T98G cells.

Authors:  Rebecca A Frum; Zakaria S Khondker; David G Kaufman
Journal:  Cell Cycle       Date:  2009-10-01       Impact factor: 4.534

5.  Construction of a cosmid library of DNA replicated early in the S phase of normal human fibroblasts.

Authors:  B P Brylawski; S M Cohen; J L Longmire; N A Doggett; M Cordeiro-Stone; D G Kaufman
Journal:  J Cell Biochem       Date:  2000-06-06       Impact factor: 4.429

6.  DNA in proximity to the site of replication is preferentially alkylated in S phase 10T1/2 cells treated with N-methyl-N-nitroso-urea.

Authors:  M Cordeiro-Stone; M D Topal; D G Kaufman
Journal:  Carcinogenesis       Date:  1982       Impact factor: 4.944

7.  Predictable dynamic program of timing of DNA replication in human cells.

Authors:  Romain Desprat; Danielle Thierry-Mieg; Nathalie Lailler; Julien Lajugie; Carl Schildkraut; Jean Thierry-Mieg; Eric E Bouhassira
Journal:  Genome Res       Date:  2009-09-18       Impact factor: 9.043

8.  Benzo[alpha]pyrene diol epoxide I binds to DNA at replication forks.

Authors:  R S Paules; M Cordeiro-Stone; M J Mass; M C Poirier; S H Yuspa; D G Kaufman
Journal:  Proc Natl Acad Sci U S A       Date:  1988-04       Impact factor: 11.205

9.  BRG1 co-localizes with DNA replication factors and is required for efficient replication fork progression.

Authors:  Stephanie M Cohen; Paul D Chastain; Gary B Rosson; Beezly S Groh; Bernard E Weissman; David G Kaufman; Scott J Bultman
Journal:  Nucleic Acids Res       Date:  2010-06-22       Impact factor: 16.971

10.  Replicon clusters are stable units of chromosome structure: evidence that nuclear organization contributes to the efficient activation and propagation of S phase in human cells.

Authors:  D A Jackson; A Pombo
Journal:  J Cell Biol       Date:  1998-03-23       Impact factor: 10.539

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  2 in total

1.  Microelectrophoretic study of environmentally induced DNA damage in fish and its use for early toxicity screening of freshwater bodies.

Authors:  Bilal Hussain; Tayyaba Sultana; Salma Sultana; K A Al-Ghanim; Shahreef Masood; Muhammad Ali; Shahid Mahboob
Journal:  Environ Monit Assess       Date:  2017-02-17       Impact factor: 2.513

2.  Application of the microfluidic-assisted replication track analysis to measure DNA repair in human and mouse cells.

Authors:  Piri Welcsh; Keffy Kehrli; Pavlo Lazarchuk; Warren Ladiges; Julia Sidorova
Journal:  Methods       Date:  2016-04-26       Impact factor: 3.608

  2 in total

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