Literature DB >> 21082442

Phosphoproteome resource for systems biology research.

Bernd Bodenmiller1, Ruedi Aebersold.   

Abstract

PhospoPep version 2.0 is a project to support systems biology signaling research by providing interactive interrogation of MS-derived phosphorylation data from four different organisms. Currently the database hosts phosphorylation data from the fly (Drosophila melanogaster), human (Homo sapiens), worm (Caenorhabditis elegans), and yeast (Saccharomyces cerevisiae). The following will give an overview of the content and usage of the PhosphoPep database.

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Year:  2011        PMID： 21082442     DOI： 10.1007/978-1-60761-977-2_19

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN： 1064-3745


  7 in total

1.  Proteome-Wide Characterizations of N6-Methyl-Adenosine Triphosphate- and N6-Furfuryl-Adenosine Triphosphate-Binding Capabilities of Kinases.

Authors:  Xuejiao Dong; Jianan Sun; Weili Miao; Chia-En A Chang; Yinsheng Wang
Journal:  Anal Chem       Date:  2021-09-22       Impact factor: 8.008

Review 2.  Mitotic exit and separation of mother and daughter cells.

Authors:  Eric L Weiss
Journal:  Genetics       Date:  2012-12       Impact factor: 4.562

3.  Proteomic investigations reveal a role for RNA processing factor THRAP3 in the DNA damage response.

Authors:  Petra Beli; Natalia Lukashchuk; Sebastian A Wagner; Brian T Weinert; Jesper V Olsen; Linda Baskcomb; Matthias Mann; Stephen P Jackson; Chunaram Choudhary
Journal:  Mol Cell       Date:  2012-03-15       Impact factor: 17.970

4.  Structural interrogation of phosphoproteome identified by mass spectrometry reveals allowed and disallowed regions of phosphoconformation.

Authors:  Arun Kumar Somavarapu; Satish Balakrishnan; Amit Kumar Singh Gautam; David S Palmer; Prasanna Venkatraman
Journal:  BMC Struct Biol       Date:  2014-03-11

5.  Mapping the Synthetic Dosage Lethality Network of CDK1/CDC28.

Authors:  Christine Zimmermann; Ignacio Garcia; Manja Omerzu; Pierre Chymkowitch; Beibei Zhang; Jorrit M Enserink
Journal:  G3 (Bethesda)       Date:  2017-06-07       Impact factor: 3.154

6.  Integrated omics in Drosophila uncover a circadian kinome.

Authors:  Chenwei Wang; Ke Shui; Shanshan Ma; Shaofeng Lin; Ying Zhang; Bo Wen; Wankun Deng; Haodong Xu; Hui Hu; Anyuan Guo; Yu Xue; Luoying Zhang
Journal:  Nat Commun       Date:  2020-06-01       Impact factor: 14.919

7.  STRIPAK regulates Slik localization to control mitotic morphogenesis and epithelial integrity.

Authors:  Camille Valérie De Jamblinne; Barbara Decelle; Mehrnoush Dehghani; Mathieu Joseph; Neera Sriskandarajah; Kévin Leguay; Basile Rambaud; Sébastien Lemieux; Philippe P Roux; David R Hipfner; Sébastien Carréno
Journal:  J Cell Biol       Date:  2020-11-02       Impact factor: 10.539
  7 in total

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