Literature DB >> 21080638

Competition-mediated pyrene-switching aptasensor: probing lysozyme in human serum with a monomer-excimer fluorescence switch.

Jin Huang1, Zhi Zhu, Suwussa Bamrungsap, Guizhi Zhu, Mingxu You, Xiaoxiao He, Kemin Wang, Weihong Tan.   

Abstract

Lysozyme (Lys) plays crucial roles in the innate immune system, and the detection of Lys in urine and serum has considerable clinical importance. Traditionally, the presence of Lys has been detected by immunoassays; however, these assays are limited by the availability of commercial antibodies and tedious protein modification and prior sample purification. To address these limitations, we report here the design, synthesis, and application of a competition-mediated pyrene-switching aptasensor for selective detection of Lys in buffer and human serum. The detection strategy is based on the attachment of pyrene molecules to both ends of a hairpin DNA strand, which becomes the partially complementary competitor to an anti-Lys aptamer. In the presence of target Lys, the aptamer hybridizes with part of the competitor, which opens the hairpin such that both pyrene molecules are spatially separated. In the presence of target Lys, however, the competitor is displaced from the aptamer by the target, subsequently forming an initial hairpin structure. This brings the two pyrene moieties into close proximity to generate an excimer, which, in turn, results in a shift of fluorescence emission from ca. 400 nm (pyrene monomer) to 495 nm (pyrene excimer). The proposed method for Lys detection showed sensitivity as low as 200 pM and high selectivity in buffer. When measured by a steady-state fluorescence spectrum, the detection of Lys in human serum showed a strong fluorescent background, which obscured detection of the excimer signal. However, time-resolved emission measurement (TREM) supported the potential of the method in complex environments with background fluorescence by demonstrating the temporal separation of probe fluorescence emission decay from the intense background signal. We have also demonstrated that the same strategy can be applied to the detection of small biomolecules such as adenosine triphosphate (ATP), showing the generality of our approach. Therefore, the competition-mediated pyrene-switching aptasensor is promising to have potential for clinical and forensic applications.

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Year:  2010        PMID: 21080638      PMCID: PMC3005583          DOI: 10.1021/ac102277p

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  41 in total

Review 1.  Aptamers: an emerging class of molecules that rival antibodies in diagnostics.

Authors:  S D Jayasena
Journal:  Clin Chem       Date:  1999-09       Impact factor: 8.327

2.  Light-switching excimer probes for rapid protein monitoring in complex biological fluids.

Authors:  Chaoyong James Yang; Steffen Jockusch; Marie Vicens; Nicholas J Turro; Weihong Tan
Journal:  Proc Natl Acad Sci U S A       Date:  2005-11-21       Impact factor: 11.205

3.  Aptamer biosensor for label-free impedance spectroscopy detection of proteins based on recognition-induced switching of the surface charge.

Authors:  Marcela C Rodriguez; Abdel-Nasser Kawde; Joseph Wang
Journal:  Chem Commun (Camb)       Date:  2005-07-12       Impact factor: 6.222

4.  A pyrene-labeled G-quadruplex oligonucleotide as a fluorescent probe for potassium ion detection in biological applications.

Authors:  Satoru Nagatoishi; Takahiko Nojima; Bernard Juskowiak; Shigeori Takenaka
Journal:  Angew Chem Int Ed Engl       Date:  2005-08-12       Impact factor: 15.336

5.  Amplified analysis of low-molecular-weight substrates or proteins by the self-assembly of DNAzyme-aptamer conjugates.

Authors:  Di Li; Bella Shlyahovsky; Johann Elbaz; Itamar Willner
Journal:  J Am Chem Soc       Date:  2007-04-14       Impact factor: 15.419

6.  Aptamer-based biosensors for label-free voltammetric detection of lysozyme.

Authors:  Alan K H Cheng; Bixia Ge; Hua-Zhong Yu
Journal:  Anal Chem       Date:  2007-06-13       Impact factor: 6.986

7.  Use of serum antibody and lysozyme levels for diagnosis of leprosy and tuberculosis.

Authors:  K A Near; M J Lefford
Journal:  J Clin Microbiol       Date:  1992-05       Impact factor: 5.948

8.  A DNA aptamer that binds adenosine and ATP.

Authors:  D E Huizenga; J W Szostak
Journal:  Biochemistry       Date:  1995-01-17       Impact factor: 3.162

9.  Pyrene excimer signaling molecular beacons for probing nucleic acids.

Authors:  Patrick Conlon; Chaoyong James Yang; Yanrong Wu; Yan Chen; Karen Martinez; Youngmi Kim; Nathan Stevens; Angel A Marti; Steffen Jockusch; Nicholas J Turro; Weihong Tan
Journal:  J Am Chem Soc       Date:  2007-12-14       Impact factor: 15.419

10.  Pyrene binary probes for unambiguous detection of mRNA using time-resolved fluorescence spectroscopy.

Authors:  Angel A Martí; Xiaoxu Li; Steffen Jockusch; Zengmin Li; Bindu Raveendra; Sergey Kalachikov; James J Russo; Irina Morozova; Sathyanarayanan V Puthanveettil; Jingyue Ju; Nicholas J Turro
Journal:  Nucleic Acids Res       Date:  2006-06-12       Impact factor: 16.971

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  5 in total

1.  Integrated Microfluidic Aptasensor for Mass Spectrometric Detection of Vasopressin in Human Plasma Ultrafiltrate.

Authors:  J Yang; J Zhu; R Pei; J A Oliver; D W Landry; M N Stojanovic; Q Lin
Journal:  Anal Methods       Date:  2016-05-11       Impact factor: 2.896

Review 2.  Aptamer-based targeted therapy.

Authors:  Guizhi Zhu; Xiaoyuan Chen
Journal:  Adv Drug Deliv Rev       Date:  2018-08-17       Impact factor: 15.470

Review 3.  Aptamer in bioanalytical applications.

Authors:  Anton B Iliuk; Lianghai Hu; W Andy Tao
Journal:  Anal Chem       Date:  2011-05-05       Impact factor: 6.986

Review 4.  Recent Advances in Nucleic Acid Targeting Probes and Supramolecular Constructs Based on Pyrene-Modified Oligonucleotides.

Authors:  Olga A Krasheninina; Darya S Novopashina; Evgeny K Apartsin; Alya G Venyaminova
Journal:  Molecules       Date:  2017-11-30       Impact factor: 4.411

Review 5.  Fluorescence Sensing Using DNA Aptamers in Cancer Research and Clinical Diagnostics.

Authors:  Domenica Musumeci; Chiara Platella; Claudia Riccardi; Federica Moccia; Daniela Montesarchio
Journal:  Cancers (Basel)       Date:  2017-12-20       Impact factor: 6.639

  5 in total

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