Literature DB >> 21079274

Power Watershed: A Unifying Graph-Based Optimization Framework.

Camille Couprie, Leo Grady, Laurent Najman, Hugues Talbot.   

Abstract

In this work, we extend a common framework for graph-based image segmentation that includes the graph cuts, random walker, and shortest path optimization algorithms. Viewing an image as a weighted graph, these algorithms can be expressed by means of a common energy function with differing choices of a parameter q acting as an exponent on the differences between neighboring nodes. Introducing a new parameter p that fixes a power for the edge weights allows us to also include the optimal spanning forest algorithm for watershed in this same framework. We then propose a new family of segmentation algorithms that fixes p to produce an optimal spanning forest but varies the power q beyond the usual watershed algorithm, which we term the power watershed. In particular, when q=2, the power watershed leads to a multilabel, scale and contrast invariant, unique global optimum obtained in practice in quasi-linear time. Placing the watershed algorithm in this energy minimization framework also opens new possibilities for using unary terms in traditional watershed segmentation and using watershed to optimize more general models of use in applications beyond image segmentation.

Entities:  

Year:  2010        PMID: 21079274     DOI: 10.1109/TPAMI.2010.200

Source DB:  PubMed          Journal:  IEEE Trans Pattern Anal Mach Intell        ISSN: 0098-5589            Impact factor:   6.226


  15 in total

1.  Joint graph cut and relative fuzzy connectedness image segmentation algorithm.

Authors:  Krzysztof Chris Ciesielski; Paulo A V Miranda; Alexandre X Falcão; Jayaram K Udupa
Journal:  Med Image Anal       Date:  2013-07-03       Impact factor: 8.545

2.  Automated profiling of individual cell-cell interactions from high-throughput time-lapse imaging microscopy in nanowell grids (TIMING).

Authors:  Amine Merouane; Nicolas Rey-Villamizar; Yanbin Lu; Ivan Liadi; Gabrielle Romain; Jennifer Lu; Harjeet Singh; Laurence J N Cooper; Navin Varadarajan; Badrinath Roysam
Journal:  Bioinformatics       Date:  2015-06-09       Impact factor: 6.937

3.  Inferior vena cava segmentation with parameter propagation and graph cut.

Authors:  Zixu Yan; Feng Chen; Fa Wu; Dexing Kong
Journal:  Int J Comput Assist Radiol Surg       Date:  2017-04-18       Impact factor: 2.924

4.  GPU-based relative fuzzy connectedness image segmentation.

Authors:  Ying Zhuge; Krzysztof C Ciesielski; Jayaram K Udupa; Robert W Miller
Journal:  Med Phys       Date:  2013-01       Impact factor: 4.071

5.  Fluid-Structure Interaction Analysis of Papillary Muscle Forces Using a Comprehensive Mitral Valve Model with 3D Chordal Structure.

Authors:  Milan Toma; Morten Ø Jensen; Daniel R Einstein; Ajit P Yoganathan; Richard P Cochran; Karyn S Kunzelman
Journal:  Ann Biomed Eng       Date:  2015-07-17       Impact factor: 3.934

6.  An efficient algorithm for mapping imaging data to 3D unstructured grids in computational biomechanics.

Authors:  Daniel R Einstein; Andrew P Kuprat; Xiangmin Jiao; James P Carson; David M Einstein; Richard E Jacob; Richard A Corley
Journal:  Int J Numer Method Biomed Eng       Date:  2012-05-16       Impact factor: 2.747

7.  New software developments for quality mesh generation and optimization from biomedical imaging data.

Authors:  Zeyun Yu; Jun Wang; Zhanheng Gao; Ming Xu; Masahiko Hoshijima
Journal:  Comput Methods Programs Biomed       Date:  2013-09-04       Impact factor: 5.428

8.  GC-ASM: Synergistic Integration of Graph-Cut and Active Shape Model Strategies for Medical Image Segmentation.

Authors:  Xinjian Chen; Jayaram K Udupa; Abass Alavi; Drew A Torigian
Journal:  Comput Vis Image Underst       Date:  2013-05       Impact factor: 3.876

Review 9.  Sparse Data-Driven Learning for Effective and Efficient Biomedical Image Segmentation.

Authors:  John A Onofrey; Lawrence H Staib; Xiaojie Huang; Fan Zhang; Xenophon Papademetris; Dimitris Metaxas; Daniel Rueckert; James S Duncan
Journal:  Annu Rev Biomed Eng       Date:  2020-03-13       Impact factor: 11.324

10.  Microscopy Image Browser: A Platform for Segmentation and Analysis of Multidimensional Datasets.

Authors:  Ilya Belevich; Merja Joensuu; Darshan Kumar; Helena Vihinen; Eija Jokitalo
Journal:  PLoS Biol       Date:  2016-01-04       Impact factor: 8.029

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