Literature DB >> 21073239

Time-dependent corrections to effective rate and event statistics in Michaelis-Menten kinetics.

N A Sinitsyn1, I Nemenman.   

Abstract

The authors generalise the concept of the geometric phase in stochastic kinetics to a non-cyclic evolution. Its application is demonstrated on kinetics of the Michaelis-Menten reaction. It is shown that the non-periodic geometric phase is responsible for the correction to the Michaelis-Menten law when parameters, such as a substrate concentration, are changing with time. The authors apply these ideas to a model of chemical reactions in a bacterial culture of a growing size, where the geometric correction qualitatively changes the outcome of the reaction kinetics.

Mesh:

Year:  2010        PMID: 21073239     DOI: 10.1049/iet-syb.2010.0064

Source DB:  PubMed          Journal:  IET Syst Biol        ISSN: 1751-8849            Impact factor:   1.615


  3 in total

1.  Fitness in time-dependent environments includes a geometric phase contribution.

Authors:  Sorin Tanase-Nicola; Ilya Nemenman
Journal:  J R Soc Interface       Date:  2011-11-23       Impact factor: 4.118

2.  Effect of stochastic gating on channel-facilitated transport of non-interacting and strongly repelling solutes.

Authors:  Alexander M Berezhkovskii; Sergey M Bezrukov
Journal:  J Chem Phys       Date:  2017-08-28       Impact factor: 3.488

3.  Variance-corrected Michaelis-Menten equation predicts transient rates of single-enzyme reactions and response times in bacterial gene-regulation.

Authors:  Otto Pulkkinen; Ralf Metzler
Journal:  Sci Rep       Date:  2015-12-04       Impact factor: 4.379

  3 in total

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