Literature DB >> 21073182

Correlation between desorption force measured by atomic force microscopy and adsorption free energy measured by surface plasmon resonance spectroscopy for peptide-surface interactions.

Yang Wei1, Robert A Latour.   

Abstract

Surface plasmon resonance (SPR) spectroscopy is a useful technique for thermodynamically characterizing peptide-surface interactions; however, its usefulness is limited to the types of surfaces that can readily be formed as thin layers on the nanometer scale on metallic biosensor substrates. Atomic force microscopy (AFM), on the other hand, can be used with any microscopically flat surface, thus making it more versatile for studying peptide-surface interactions. AFM, however, has the drawback of data interpretation due to questions regarding peptide-to-probe-tip density. This problem could be overcome if results from a standardized AFM method could be correlated with SPR results for a similar set of peptide-surface interactions so that AFM studies using the standardized method could be extended to characterize peptide-surface interactions for surfaces that are not amenable for characterization by SPR. In this article, we present the development and application of an AFM method to measure adsorption forces for host-guest peptides sequence on surfaces consisting of alkanethiol self-assembled monolayers (SAMs) with different functionality. The results from these studies show that a linear correlation exists between these data and the adsorption free energy (ΔG(o)(ads)) values associated with a similar set of peptide-surface systems available from SPR measurements. These methods will be extremely useful to characterize thermodynamically the adsorption behavior for peptides on a much broader range of surfaces than can be used with SPR to provide information related to understanding protein adsorption behavior to these surfaces and to provide an experimental database that can be used for the evaluation, modification, and validation of force field parameters that are needed to represent protein adsorption behavior accurately for molecular simulations.

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Year:  2010        PMID: 21073182      PMCID: PMC3006061          DOI: 10.1021/la103685d

Source DB:  PubMed          Journal:  Langmuir        ISSN: 0743-7463            Impact factor:   3.882


  41 in total

1.  Simultaneous AFM manipulation and fluorescence imaging of single DNA strands.

Authors:  Andrew Hards; Chunqing Zhou; Markus Seitz; Christoph Bräuchle; Andreas Zumbusch
Journal:  Chemphyschem       Date:  2005-03       Impact factor: 3.102

2.  Improved method for the preparation of carboxylic acid and amine terminated self-assembled monolayers of alkanethiolates.

Authors:  Hua Wang; Shengfu Chen; Lingyan Li; Shaoyi Jiang
Journal:  Langmuir       Date:  2005-03-29       Impact factor: 3.882

3.  A simple method for displaying the hydropathic character of a protein.

Authors:  J Kyte; R F Doolittle
Journal:  J Mol Biol       Date:  1982-05-05       Impact factor: 5.469

4.  Detection and localization of individual antibody-antigen recognition events by atomic force microscopy.

Authors:  P Hinterdorfer; W Baumgartner; H J Gruber; K Schilcher; H Schindler
Journal:  Proc Natl Acad Sci U S A       Date:  1996-04-16       Impact factor: 11.205

5.  SPR Studies of the Nonspecific Adsorption Kinetics of Human IgG and BSA on Gold Surfaces Modified by Self-Assembled Monolayers (SAMs)

Authors: 
Journal:  J Colloid Interface Sci       Date:  1997-01-01       Impact factor: 8.128

6.  Assessment of the transferability of a protein force field for the simulation of peptide-surface interactions.

Authors:  Nadeem A Vellore; Jeremy A Yancey; Galen Collier; Robert A Latour; Steven J Stuart
Journal:  Langmuir       Date:  2010-05-18       Impact factor: 3.882

7.  Antibody linking to atomic force microscope tips via disulfide bond formation.

Authors:  A S M Kamruzzahan; Andreas Ebner; Linda Wildling; Ferry Kienberger; Christian K Riener; Christoph D Hahn; Philipp D Pollheimer; Peter Winklehner; Martin Hölzl; Bernd Lackner; Daniela M Schörkl; Peter Hinterdorfer; Hermann J Gruber
Journal:  Bioconjug Chem       Date:  2006 Nov-Dec       Impact factor: 4.774

8.  Quantitative affinity of genetically engineered repeating polypeptides to inorganic surfaces.

Authors:  Urartu O S Seker; Brandon Wilson; Deniz Sahin; Candan Tamerler; Mehmet Sarikaya
Journal:  Biomacromolecules       Date:  2009-02-09       Impact factor: 6.988

9.  Effect of surface wettability on the adhesion of proteins.

Authors:  Ananthakrishnan Sethuraman; Mina Han; Ravi S Kane; Georges Belfort
Journal:  Langmuir       Date:  2004-08-31       Impact factor: 3.882

10.  Determination of the adsorption free energy for peptide-surface interactions by SPR spectroscopy.

Authors:  Yang Wei; Robert A Latour
Journal:  Langmuir       Date:  2008-05-29       Impact factor: 3.882

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  9 in total

1.  Perspectives on the simulation of protein-surface interactions using empirical force field methods.

Authors:  Robert A Latour
Journal:  Colloids Surf B Biointerfaces       Date:  2014-06-30       Impact factor: 5.268

2.  Parameterization of an interfacial force field for accurate representation of peptide adsorption free energy on high-density polyethylene.

Authors:  Tigran M Abramyan; James A Snyder; Jeremy A Yancey; Aby A Thyparambil; Yang Wei; Steven J Stuart; Robert A Latour
Journal:  Biointerphases       Date:  2015-06-27       Impact factor: 2.456

3.  Insights into the Interactions of Amino Acids and Peptides with Inorganic Materials Using Single-Molecule Force Spectroscopy.

Authors:  Priyadip Das; Tal Duanias-Assaf; Meital Reches
Journal:  J Vis Exp       Date:  2017-03-06       Impact factor: 1.355

4.  Determination of peptide-surface adsorption free energy for material surfaces not conducive to SPR or QCM using AFM.

Authors:  Aby A Thyparambil; Yang Wei; Robert A Latour
Journal:  Langmuir       Date:  2012-03-20       Impact factor: 3.882

Review 5.  A bottom-up approach to understanding protein layer formation at solid-liquid interfaces.

Authors:  Mark Kastantin; Blake B Langdon; Daniel K Schwartz
Journal:  Adv Colloid Interface Sci       Date:  2013-12-28       Impact factor: 12.984

6.  Apparent activation energies associated with protein dynamics on hydrophobic and hydrophilic surfaces.

Authors:  Blake B Langdon; Mark Kastantin; Daniel K Schwartz
Journal:  Biophys J       Date:  2012-06-05       Impact factor: 4.033

7.  Peptide-surface adsorption free energy comparing solution conditions ranging from low to medium salt concentrations.

Authors:  Yang Wei; Aby A Thyparambil; Robert A Latour
Journal:  Chemphyschem       Date:  2012-10-05       Impact factor: 3.102

8.  Development of a tuned interfacial force field parameter set for the simulation of protein adsorption to silica glass.

Authors:  James A Snyder; Tigran Abramyan; Jeremy A Yancey; Aby A Thyparambil; Yang Wei; Steven J Stuart; Robert A Latour
Journal:  Biointerphases       Date:  2012-09-01       Impact factor: 2.456

9.  Fundamentals of nanoscale polymer-protein interactions and potential contributions to solid-state nanobioarrays.

Authors:  Jong-in Hahm
Journal:  Langmuir       Date:  2014-01-29       Impact factor: 3.882

  9 in total

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