Literature DB >> 21072255

Solvation of Glucose, Trehalose, and Sucrose by the Soft Sticky Dipole-Quadrupole-Octupole Water Model.

Jerez A Te1, Ming-Liang Tan, Toshiko Ichiye.   

Abstract

Water structure around sugars modeled by partial charges is compared for soft-sticky dipole-quadrupole-octupole (SSDQO), a fast single-site multipole model, and commonly used multi-site models in Monte Carlo simulations. Radial distribution functions and coordination numbers of all the models indicate similar hydration by hydrogen-bond donor and acceptor waters. However, the new optimized SSDQO1 parameters as well as TIP4P-Ew and TIP5P predict a "lone-pair" orientation for the water accepting the sugar hydroxyl hydrogen bond that is more consistent with the limited experimental data than the "dipole" orientation in SPC/E, which has important implications for studies of the cryoprotectant properties of sugars.

Entities:  

Year:  2010        PMID: 21072255      PMCID: PMC2975465          DOI: 10.1016/j.cplett.2010.04.020

Source DB:  PubMed          Journal:  Chem Phys Lett        ISSN: 0009-2614            Impact factor:   2.328


  18 in total

1.  Solvation of Biomolecules by the Soft Sticky Dipole-Quadrupole-Octupole Water Model.

Authors:  Jerez A Te; Ming-Liang Tan; Toshiko Ichiye
Journal:  Chem Phys Lett       Date:  2010-02-05       Impact factor: 2.328

2.  Internal motions and hydration of sucrose in a diluted water solution.

Authors:  S B Engelsen; S Pérez
Journal:  J Mol Graph Model       Date:  1997-04       Impact factor: 2.518

3.  Study of multipole contributions to the structure of water around ions in solution using the soft sticky dipole-quadrupole-octupole (SSDQO) model of water.

Authors:  Ming-Liang Tan; Laurentia Lucan; Toshiko Ichiye
Journal:  J Chem Phys       Date:  2006-05-07       Impact factor: 3.488

4.  Dynamical properties of the soft sticky dipole-quadrupole-octupole water model: a molecular dynamics study.

Authors:  Snehasis Chowdhuri; Ming-Liang Tan; Toshiko Ichiye
Journal:  J Chem Phys       Date:  2006-10-14       Impact factor: 3.488

5.  How homogeneous are the trehalose, maltose, and sucrose water solutions? An insight from molecular dynamics simulations.

Authors:  A Lerbret; P Bordat; F Affouard; M Descamps; F Migliardo
Journal:  J Phys Chem B       Date:  2005-06-02       Impact factor: 2.991

6.  Structure of aqueous glucose solutions as determined by neutron diffraction with isotopic substitution experiments and molecular dynamics calculations.

Authors:  P E Mason; G W Neilson; J E Enderby; M-L Saboungi; J W Brady
Journal:  J Phys Chem B       Date:  2005-07-14       Impact factor: 2.991

Review 7.  Reversible dehydration of trehalose and anhydrobiosis: from solution state to an exotic crystal?

Authors:  F Sussich; C Skopec; J Brady; A Cesàro
Journal:  Carbohydr Res       Date:  2001-08-30       Impact factor: 2.104

8.  A computational study of hydration, solution structure, and dynamics in dilute carbohydrate solutions.

Authors:  Sau Lawrence Lee; Pablo G Debenedetti; Jeffrey R Errington
Journal:  J Chem Phys       Date:  2005-05-22       Impact factor: 3.488

9.  A new GROMOS force field for hexopyranose-based carbohydrates.

Authors:  Roberto D Lins; Philippe H Hünenberger
Journal:  J Comput Chem       Date:  2005-10       Impact factor: 3.376

10.  Carbohydrate solution simulations: producing a force field with experimentally consistent primary alcohol rotational frequencies and populations.

Authors:  Michelle Kuttel; J W Brady; Kevin J Naidoo
Journal:  J Comput Chem       Date:  2002-10       Impact factor: 3.376

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  3 in total

1.  UNDERSTANDING STRUCTURAL EFFECTS OF MULTIPOLE MOMENTS ON AQUEOUS SOLVATION OF IONS USING THE SOFT-STICKY DIPOLE-QUADRUPOLE-OCTUPOLE WATER MODEL.

Authors:  Jerez A Te; Toshiko Ichiye
Journal:  Chem Phys Lett       Date:  2010-10-29       Impact factor: 2.328

2.  Temperature and pressure dependence of the optimized soft-sticky dipole-quadrupole-octupole water model.

Authors:  Jerez A Te; Toshiko Ichiye
Journal:  J Chem Phys       Date:  2010-03-21       Impact factor: 3.488

3.  The large quadrupole of water molecules.

Authors:  Shuqiang Niu; Ming-Liang Tan; Toshiko Ichiye
Journal:  J Chem Phys       Date:  2011-04-07       Impact factor: 3.488

  3 in total

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