Literature DB >> 21071832

An altered method of feeding RNAi that knocks down multiple genes simultaneously in the nematode Caenorhabditis elegans.

Kenji Gouda1, Yohei Matsunaga, Takashi Iwasaki, Tsuyoshi Kawano.   

Abstract

In reverse genetics, RNA interference (RNAi) which is substitutable for gene-disruption, is an outstanding method for knockdown of a gene's function. In Caenorhabditis elegans, feeding RNAi is most convenient, but this RNAi is not suitable for knockdown of multiple genes. Hence, we attempted to establish an efficient method of feeding RNAi for multiple knockdown. We produced bacteria yielding three distinct double-stranded RNAs bound to one another, and fed those bacteria to C. elegans. Quantitative RT-PCR and observation of phenotypes indicated that our method is much more efficient than the traditional one. Our method is useful for investigating genes' functions in C. elegans.

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Year:  2010        PMID: 21071832     DOI: 10.1271/bbb.100579

Source DB:  PubMed          Journal:  Biosci Biotechnol Biochem        ISSN: 0916-8451            Impact factor:   2.043


  7 in total

1.  Germ-granule components prevent somatic development in the C. elegans germline.

Authors:  Dustin L Updike; Andrew Kekūpa'a Knutson; Thea A Egelhofer; Anne C Campbell; Susan Strome
Journal:  Curr Biol       Date:  2014-04-17       Impact factor: 10.834

2.  Host-mediated RNAi for simultaneous silencing of different functional groups of genes in Meloidogyne incognita using fusion cassettes in Nicotiana tabacum.

Authors:  Alkesh Hada; Divya Singh; Pradeep K Papolu; Prakash Banakar; Ankita Raj; Uma Rao
Journal:  Plant Cell Rep       Date:  2021-08-13       Impact factor: 4.570

3.  Transcription factor redundancy and tissue-specific regulation: evidence from functional and physical network connectivity.

Authors:  Steven G Kuntz; Brian A Williams; Paul W Sternberg; Barbara J Wold
Journal:  Genome Res       Date:  2012-06-22       Impact factor: 9.043

4.  A systematic analysis of protein palmitoylation in Caenorhabditis elegans.

Authors:  Matthew J Edmonds; Alan Morgan
Journal:  BMC Genomics       Date:  2014-10-02       Impact factor: 3.969

5.  Autophagy and modular restructuring of metabolism control germline tumor differentiation and proliferation in C. elegans.

Authors:  Ligia C Gomes; Devang Odedra; Ivan Dikic; Christian Pohl
Journal:  Autophagy       Date:  2016-01-13       Impact factor: 16.016

6.  The CONJUDOR pipeline for multiplexed knockdown of gene pairs identifies RBBP-5 as a germ cell reprogramming barrier in C. elegans.

Authors:  Marlon Kazmierczak; Carlota Farré I Díaz; Andreas Ofenbauer; Sergej Herzog; Baris Tursun
Journal:  Nucleic Acids Res       Date:  2021-02-26       Impact factor: 16.971

7.  Simultaneous RNAi Knockdown of Three FMRFamide-Like Peptide Genes, Mi-flp1, Mi-flp12, and Mi-flp18 Provides Resistance to Root-Knot Nematode, Meloidogyne incognita.

Authors:  Prakash Banakar; Alkesh Hada; Pradeep K Papolu; Uma Rao
Journal:  Front Microbiol       Date:  2020-10-23       Impact factor: 5.640

  7 in total

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