Literature DB >> 21070269

Genome-wide SNP association-based localization of a dwarfism gene in Friesian dwarf horses.

N Orr1, W Back, J Gu, P Leegwater, P Govindarajan, J Conroy, B Ducro, J A M Van Arendonk, D E MacHugh, S Ennis, E W Hill, P A J Brama.   

Abstract

The recent completion of the horse genome and commercial availability of an equine SNP genotyping array has facilitated the mapping of disease genes. We report putative localization of the gene responsible for dwarfism, a trait in Friesian horses that is thought to have a recessive mode of inheritance, to a 2-MB region of chromosome 14 using just 10 affected animals and 10 controls. We successfully genotyped 34,429 SNPs that were tested for association with dwarfism using chi-square tests. The most significant SNP in our study, BIEC2-239376 (P(2df)=4.54 × 10(-5), P(rec)=7.74 × 10(-6)), is located close to a gene implicated in human dwarfism. Fine-mapping and resequencing analyses did not aid in further localization of the causative variant, and replication of our findings in independent sample sets will be necessary to confirm these results.
© 2010 The Authors, Journal compilation © 2010 Stichting International Foundation for Animal Genetics.

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Year:  2010        PMID: 21070269     DOI: 10.1111/j.1365-2052.2010.02091.x

Source DB:  PubMed          Journal:  Anim Genet        ISSN: 0268-9146            Impact factor:   3.169


  11 in total

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10.  Identification of Novel lncRNAs Differentially Expressed in Placentas of Chinese Ningqiang Pony and Yili Horse Breeds.

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Journal:  Animals (Basel)       Date:  2020-01-11       Impact factor: 2.752

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