Literature DB >> 21068271

Removal of spurious correlations between spikes and local field potentials.

Theodoros P Zanos1, Patrick J Mineault, Christopher C Pack.   

Abstract

Single neurons carry out important sensory and motor functions related to the larger networks in which they are embedded. Understanding the relationships between single-neuron spiking and network activity is therefore of great importance and the latter can be readily estimated from low-frequency brain signals known as local field potentials (LFPs). In this work we examine a number of issues related to the estimation of spike and LFP signals. We show that spike trains and individual spikes contain power at the frequencies that are typically thought to be exclusively related to LFPs, such that simple frequency-domain filtering cannot be effectively used to separate the two signals. Ground-truth simulations indicate that the commonly used method of estimating the LFP signal by low-pass filtering the raw voltage signal leads to artifactual correlations between spikes and LFPs and that these correlations exert a powerful influence on popular metrics of spike-LFP synchronization. Similar artifactual results were seen in data obtained from electrophysiological recordings in macaque visual cortex, when low-pass filtering was used to estimate LFP signals. In contrast LFP tuning curves in response to sensory stimuli do not appear to be affected by spike contamination, either in simulations or in real data. To address the issue of spike contamination, we devised a novel Bayesian spike removal algorithm and confirmed its effectiveness in simulations and by applying it to the electrophysiological data. The algorithm, based on a rigorous mathematical framework, outperforms other methods of spike removal on most metrics of spike-LFP correlations. Following application of this spike removal algorithm, many of our electrophysiological recordings continued to exhibit spike-LFP correlations, confirming previous reports that such relationships are a genuine aspect of neuronal activity. Overall, these results show that careful preprocessing is necessary to remove spikes from LFP signals, but that when effective spike removal is used, spike-LFP correlations can potentially yield novel insights about brain function.

Mesh:

Year:  2010        PMID: 21068271     DOI: 10.1152/jn.00642.2010

Source DB:  PubMed          Journal:  J Neurophysiol        ISSN: 0022-3077            Impact factor:   2.714


  77 in total

1.  Relationships between spike-free local field potentials and spike timing in human temporal cortex.

Authors:  Stavros Zanos; Theodoros P Zanos; Vasilis Z Marmarelis; George A Ojemann; Eberhard E Fetz
Journal:  J Neurophysiol       Date:  2011-12-07       Impact factor: 2.714

2.  Robustness of traveling waves in ongoing activity of visual cortex.

Authors:  Ian Nauhaus; Laura Busse; Dario L Ringach; Matteo Carandini
Journal:  J Neurosci       Date:  2012-02-29       Impact factor: 6.167

3.  Inhibition recruitment in prefrontal cortex during sleep spindles and gating of hippocampal inputs.

Authors:  Adrien Peyrache; Francesco P Battaglia; Alain Destexhe
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-26       Impact factor: 11.205

Review 4.  The origin of extracellular fields and currents--EEG, ECoG, LFP and spikes.

Authors:  György Buzsáki; Costas A Anastassiou; Christof Koch
Journal:  Nat Rev Neurosci       Date:  2012-05-18       Impact factor: 34.870

Review 5.  Modelling and analysis of local field potentials for studying the function of cortical circuits.

Authors:  Gaute T Einevoll; Christoph Kayser; Nikos K Logothetis; Stefano Panzeri
Journal:  Nat Rev Neurosci       Date:  2013-11       Impact factor: 34.870

6.  Space coding by gamma oscillations in the barn owl optic tectum.

Authors:  Devarajan Sridharan; Kwabena Boahen; Eric I Knudsen
Journal:  J Neurophysiol       Date:  2011-02-16       Impact factor: 2.714

7.  The integrative role of the pedunculopontine nucleus in human gait.

Authors:  Brian Lau; Marie-Laure Welter; Hayat Belaid; Sara Fernandez Vidal; Eric Bardinet; David Grabli; Carine Karachi
Journal:  Brain       Date:  2015-03-12       Impact factor: 13.501

Review 8.  Gamma oscillations in the midbrain spatial attention network: linking circuits to function.

Authors:  Devarajan Sridharan; Eric I Knudsen
Journal:  Curr Opin Neurobiol       Date:  2014-12-06       Impact factor: 6.627

9.  High γ power in ECoG reflects cortical electrical stimulation effects on unit activity in layers V/VI.

Authors:  Azadeh Yazdan-Shahmorad; Daryl R Kipke; Mark J Lehmkuhle
Journal:  J Neural Eng       Date:  2013-10-08       Impact factor: 5.379

10.  Age Is Associated with Reduced Sharp-Wave Ripple Frequency and Altered Patterns of Neuronal Variability.

Authors:  Jean-Paul L Wiegand; Daniel T Gray; Lesley A Schimanski; Peter Lipa; C A Barnes; Stephen L Cowen
Journal:  J Neurosci       Date:  2016-05-18       Impact factor: 6.167

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