Literature DB >> 21063068

Profiling of regulatory microRNA transcriptomes in various biological processes: a review.

A A Shah1, E Meese, N Blin.   

Abstract

A class of small, non-coding ribonucleic acids, termed microRNA (miRNA), has recently emerged as a new key player in the cellular control of gene expression. By either blocking translation or inducing target mRNA degradation, miRNA not only participates in regular biological processes within cells and tissues but is also involved in pathological processes. Many human malignancies have been linked to specific miRNA expression patterns, raising hopes for new approaches to therapy. While such human disease-related mechanisms have been widely discussed and frequently reviewed, miRNA's general significance in animals has been less in editorial focus, despite its obvious role in basic physiological processes, e.g. neurosensory maturation, development of fertility, and hibernation. Using selected examples, this review highlights our current knowledge of miRNA's potential and its promise as a new tool for gene regulation.

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Year:  2010        PMID: 21063068     DOI: 10.1007/BF03208880

Source DB:  PubMed          Journal:  J Appl Genet        ISSN: 1234-1983            Impact factor:   2.653


  59 in total

1.  TargetScreen: an unbiased approach to identify functionally important microRNA targets.

Authors:  Konstantinos J Mavrakis; Hans-Guido Wendel
Journal:  Cell Cycle       Date:  2010-06-01       Impact factor: 4.534

2.  MicroRNAs are essential for development and function of inner ear hair cells in vertebrates.

Authors:  Lilach M Friedman; Amiel A Dror; Eyal Mor; Tamar Tenne; Ginat Toren; Takunori Satoh; Deborah J Biesemeier; Noam Shomron; Donna M Fekete; Eran Hornstein; Karen B Avraham
Journal:  Proc Natl Acad Sci U S A       Date:  2009-04-28       Impact factor: 11.205

3.  MicroRNA-181 family predicts response to concomitant chemoradiotherapy with temozolomide in glioblastoma patients.

Authors:  O Slaby; R Lakomy; P Fadrus; R Hrstka; L Kren; E Lzicarova; M Smrcka; M Svoboda; H Dolezalova; J Novakova; D Valik; R Vyzula; J Michalek
Journal:  Neoplasma       Date:  2010       Impact factor: 2.575

4.  microRNA miR-196a-2 and breast cancer: a genetic and epigenetic association study and functional analysis.

Authors:  Aaron E Hoffman; Tongzhang Zheng; Chunhui Yi; Derek Leaderer; Joanne Weidhaas; Frank Slack; Yawei Zhang; Trupti Paranjape; Yong Zhu
Journal:  Cancer Res       Date:  2009-06-30       Impact factor: 12.701

5.  Lack of Tff3 peptide results in hearing impairment and accelerated presbyacusis.

Authors:  Maria Lubka; Marcus Müller; Mirela Baus-Loncar; Margitta Hinz; Karolina Blaschke; Werner Hoffmann; Markus Pfister; Hubert Löwenheim; Carsten M Pusch; Marlies Knipper; Nikolaus Blin
Journal:  Cell Physiol Biochem       Date:  2008-04-24

6.  Plasma microRNAs are promising novel biomarkers for early detection of colorectal cancer.

Authors:  Zhaohui Huang; Dan Huang; Shujuan Ni; Zhilei Peng; Weiqi Sheng; Xiang Du
Journal:  Int J Cancer       Date:  2010-07-01       Impact factor: 7.396

7.  Discovering microRNAs from deep sequencing data using miRDeep.

Authors:  Marc R Friedländer; Wei Chen; Catherine Adamidi; Jonas Maaskola; Ralf Einspanier; Signe Knespel; Nikolaus Rajewsky
Journal:  Nat Biotechnol       Date:  2008-04       Impact factor: 54.908

8.  miRExpress: analyzing high-throughput sequencing data for profiling microRNA expression.

Authors:  Wei-Chi Wang; Feng-Mao Lin; Wen-Chi Chang; Kuan-Yu Lin; Hsien-Da Huang; Na-Sheng Lin
Journal:  BMC Bioinformatics       Date:  2009-10-12       Impact factor: 3.169

9.  miRNAs in lung cancer - studying complex fingerprints in patient's blood cells by microarray experiments.

Authors:  Andreas Keller; Petra Leidinger; Anne Borries; Anke Wendschlag; Frank Wucherpfennig; Matthias Scheffler; Hanno Huwer; Hans-Peter Lenhof; Eckart Meese
Journal:  BMC Cancer       Date:  2009-10-06       Impact factor: 4.430

10.  Computational identification of Drosophila microRNA genes.

Authors:  Eric C Lai; Pavel Tomancak; Robert W Williams; Gerald M Rubin
Journal:  Genome Biol       Date:  2003-06-30       Impact factor: 13.583

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  15 in total

Review 1.  Current approaches to micro-RNA analysis and target gene prediction.

Authors:  Tenzin W Lhakhang; M Ahmad Chaudhry
Journal:  J Appl Genet       Date:  2011-09-03       Impact factor: 3.240

2.  Gene expression signatures and ex vivo drug sensitivity profiles in children with acute lymphoblastic leukemia.

Authors:  Joanna Szczepanek; Michal Jarzab; Malgorzata Oczko-Wojciechowska; Malgorzata Kowalska; Andrzej Tretyn; Olga Haus; Monika Pogorzala; Mariusz Wysocki; Barbara Jarzab; Jan Styczynski
Journal:  J Appl Genet       Date:  2011-10-27       Impact factor: 3.240

Review 3.  MicroRNA aberrations: An emerging field for gallbladder cancer management.

Authors:  Vishal Chandra; Jong Joo Kim; Balraj Mittal; Rajani Rai
Journal:  World J Gastroenterol       Date:  2016-02-07       Impact factor: 5.742

4.  MicroRNA expression profiling of mature ovarian teratomas.

Authors:  Ye Ding; Xiao-Yan Gu; Feng Xu; Xiao-Yan Shi; DA-Zheng Yang; Jian Zhong; Su-Min Wang
Journal:  Oncol Lett       Date:  2011-10-12       Impact factor: 2.967

5.  Utilizing antagomiR (antisense microRNA) to knock down microRNA in murine bone marrow cells.

Authors:  Chinavenmeni S Velu; H Leighton Grimes
Journal:  Methods Mol Biol       Date:  2012

Review 6.  Sequencing technologies and genome sequencing.

Authors:  Chandra Shekhar Pareek; Rafal Smoczynski; Andrzej Tretyn
Journal:  J Appl Genet       Date:  2011-06-23       Impact factor: 3.240

Review 7.  Current genetic methodologies in the identification of disaster victims and in forensic analysis.

Authors:  Ewa Ziętkiewicz; Magdalena Witt; Patrycja Daca; Jadwiga Zebracka-Gala; Mariusz Goniewicz; Barbara Jarząb; Michał Witt
Journal:  J Appl Genet       Date:  2011-10-15       Impact factor: 3.240

8.  Engineered chloroplast dsRNA silences cytochrome p450 monooxygenase, V-ATPase and chitin synthase genes in the insect gut and disrupts Helicoverpa zea larval development and pupation.

Authors:  Shuangxia Jin; Nameirakpam D Singh; Lebin Li; Xianlong Zhang; Henry Daniell
Journal:  Plant Biotechnol J       Date:  2015-03-17       Impact factor: 9.803

9.  A novel dual-fluorescence strategy for functionally validating microRNA targets in 3' untranslated regions: regulation of the inward rectifier potassium channel K(ir)2.1 by miR-212.

Authors:  Dana Goldoni; Janet M Yarham; Mary K McGahon; Anna O'Connor; Jasenka Guduric-Fuchs; Kevin Edgar; Denise M McDonald; David A Simpson; Anthony Collins
Journal:  Biochem J       Date:  2012-11-15       Impact factor: 3.857

10.  Increased microRNA-630 expression in gastric cancer is associated with poor overall survival.

Authors:  Dake Chu; Zhengwei Zhao; Yunming Li; Jipeng Li; Jianyong Zheng; Weizhong Wang; Qingchuan Zhao; Gang Ji
Journal:  PLoS One       Date:  2014-03-12       Impact factor: 3.240

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