Literature DB >> 21062155

Best use of experimental data in cancer informatics.

May Yong1, Richard Begent.   

Abstract

The welcome attitude of the 'omics community, journals and funders of research towards data sharing, coupled with successful implementations of data standards, has resulted in resource dissemination and a better understanding of many diseases, including cancer. Sharing experiment data is beneficial in terms of knowledge generation, allowing reproduction and validation of results. An adherence to a reporting guideline enables full-value extraction from costly data; this is an inexpensive method to increased quality without incurring disproportionate costs. For therapy data in particular, easy access to the range of new approaches and the ability to perform valid comparisons between these approaches would be especially useful. We discuss initiatives that support resource sharing and summarize three reporting guidelines for experiment data that have been adopted successfully. Finally, we introduce a new guideline that encompasses the diverse data types in therapeutic experiments, which is intended to be of use to the cancer therapeutics community.

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Year:  2010        PMID: 21062155     DOI: 10.2217/fon.10.108

Source DB:  PubMed          Journal:  Future Oncol        ISSN: 1479-6694            Impact factor:   3.404


  2 in total

1.  Meeting Report from the Second "Minimum Information for Biological and Biomedical Investigations" (MIBBI) workshop.

Authors:  Carsten Kettner; Dawn Field; Susanna-Assunta Sansone; Chris Taylor; Jan Aerts; Nigel Binns; Andrew Blake; Cedrik M Britten; Ario de Marco; Jennifer Fostel; Pascale Gaudet; Alejandra González-Beltrán; Nigel Hardy; Jan Hellemans; Henning Hermjakob; Nick Juty; Jim Leebens-Mack; Eamonn Maguire; Steffen Neumann; Sandra Orchard; Helen Parkinson; William Piel; Shoba Ranganathan; Philippe Rocca-Serra; Annapaola Santarsiero; David Shotton; Peter Sterk; Andreas Untergasser; Patricia L Whetzel
Journal:  Stand Genomic Sci       Date:  2010-12-25

2.  Guidelines for information about therapy experiments: a proposal on best practice for recording experimental data on cancer therapy.

Authors:  Alejandra N González-Beltrán; May Y Yong; Gairin Dancey; Richard Begent
Journal:  BMC Res Notes       Date:  2012-01-06
  2 in total

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