Literature DB >> 21059358

Amyloid fibril recognition with the conformational B10 antibody fragment depends on electrostatic interactions.

Christian Haupt1, Isabel Morgado, Senthil T Kumar, Christoph Parthier, Magdalena Bereza, Peter Hortschansky, Milton T Stubbs, Uwe Horn, Marcus Fändrich.   

Abstract

Amyloid fibrils are naturally occurring polypeptide scaffolds with considerable importance for human health and disease. These supermolecular assemblies are β-sheet rich and characterized by a high structural order. Clinical diagnosis and emerging therapeutic strategies of amyloid-dependent diseases, such as Alzheimer's, rely on the specific recognition of amyloid structures by other molecules. Recently, we generated the B10 antibody fragment, which selectively binds to Alzheimer's Aβ(1-40) amyloid fibrils but does not explicitly recognize other protein conformers, such as oligomers and disaggregated Aβ peptide. B10 presents poly-amyloid specific binding and interacts with fibrillar structures consisting of different polypeptide chains. To determine the molecular basis behind its specificity, we have analyzed the molecular properties of B10 with a battery of biochemical and biophysical techniques, ranging from X-ray crystallography to chemical modification studies. We find that fibril recognition depends on positively charged residues within the B10 antigen binding site. Mutation of these basic residues into alanine potently impairs fibril binding, and reduced B10-fibril interactions are also observed when the fibril carboxyl groups are covalently masked by a chemical modification approach. These data imply that the B10 conformational specificity for amyloid fibrils depends upon specific electrostatic interactions with an acidic moiety, which is common to different amyloid fibrils. Copyright Â
© 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 21059358     DOI: 10.1016/j.jmb.2010.10.059

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  13 in total

1.  Arginine mutations in antibody complementarity-determining regions display context-dependent affinity/specificity trade-offs.

Authors:  Kathryn E Tiller; Lijuan Li; Sandeep Kumar; Mark C Julian; Shekhar Garde; Peter M Tessier
Journal:  J Biol Chem       Date:  2017-08-04       Impact factor: 5.157

2.  Pseudocatalytic Antiaggregation Activity of Antibodies: Immunoglobulins can Influence α-Synuclein Aggregation at Substoichiometric Concentrations.

Authors:  Leonid Breydo; Dave Morgan; Vladimir N Uversky
Journal:  Mol Neurobiol       Date:  2015-04-02       Impact factor: 5.590

3.  Molecular basis of β-amyloid oligomer recognition with a conformational antibody fragment.

Authors:  Isabel Morgado; Karin Wieligmann; Magdalena Bereza; Raik Rönicke; Katrin Meinhardt; Karthikeyan Annamalai; Monika Baumann; Jessica Wacker; Peter Hortschansky; Miroslav Malešević; Christoph Parthier; Christian Mawrin; Cordelia Schiene-Fischer; Klaus G Reymann; Milton T Stubbs; Jochen Balbach; Matthias Görlach; Uwe Horn; Marcus Fändrich
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-18       Impact factor: 11.205

4.  The structure of the FnI-EGF-like tandem domain of coagulation factor XII solved using SIRAS.

Authors:  D X Beringer; L M J Kroon-Batenburg
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-01-26

5.  Peptide p5 binds both heparinase-sensitive glycosaminoglycans and fibrils in patient-derived AL amyloid extracts.

Authors:  Emily B Martin; Angela Williams; Eric Heidel; Sallie Macy; Stephen J Kennel; Jonathan S Wall
Journal:  Biochem Biophys Res Commun       Date:  2013-05-23       Impact factor: 3.575

Review 6.  Conformational selection in amyloid-based immunotherapy: Survey of crystal structures of antibody-amyloid complexes.

Authors:  Buyong Ma; Jun Zhao; Ruth Nussinov
Journal:  Biochim Biophys Acta       Date:  2016-06-03

7.  The pattern recognition reagents RAGE VC1 and peptide p5 share common binding sites and exhibit specific reactivity with AA amyloid in mice.

Authors:  Stephen J Kennel; Angela Williams; Alan Stuckey; Tina Richey; Craig Wooliver; Walter Chazin; David A Stern; Emily B Martin; Jonathan S Wall
Journal:  Amyloid       Date:  2015-12-24       Impact factor: 7.141

8.  Crystal structure of a conformation-dependent rabbit IgG Fab specific for amyloid prefibrillar oligomers.

Authors:  Hiromi Arai; Charles Glabe; Hartmut Luecke
Journal:  Biochim Biophys Acta       Date:  2012-08-24

9.  Bifunctional amyloid-reactive peptide promotes binding of antibody 11-1F4 to diverse amyloid types and enhances therapeutic efficacy.

Authors:  Jonathan S Wall; Angela D Williams; James S Foster; Tina Richey; Alan Stuckey; Sallie Macy; Craig Wooliver; Shawn R Campagna; Eric D Tague; Abigail T Farmer; Ronald H Lands; Emily B Martin; R Eric Heidel; Stephen J Kennel
Journal:  Proc Natl Acad Sci U S A       Date:  2018-10-30       Impact factor: 11.205

10.  AL amyloid imaging and therapy with a monoclonal antibody to a cryptic epitope on amyloid fibrils.

Authors:  Jonathan S Wall; Stephen J Kennel; Angela Williams; Tina Richey; Alan Stuckey; Ying Huang; Sallie Macy; Robert Donnell; Robin Barbour; Peter Seubert; Dale Schenk
Journal:  PLoS One       Date:  2012-12-26       Impact factor: 3.240

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