Literature DB >> 21058339

Dual energy landscape: the functional state of the β-barrel outer membrane protein G molds its unfolding energy landscape.

Mehdi Damaghi1, K Tanuj Sapra, Stefan Köster, Özkan Yildiz, Werner Kühlbrandt, Daniel J Muller.   

Abstract

We applied dynamic single-molecule force spectroscopy to quantify the parameters (free energy of activation and distance of the transition state from the folded state) characterizing the energy barriers in the unfolding energy landscape of the outer membrane protein G (OmpG) from Escherichia coli. The pH-dependent functional switching of OmpG directs the protein along different regions on the unfolding energy landscape. The two functional states of OmpG take the same unfolding pathway during the sequential unfolding of β-hairpins I-IV. After the initial unfolding events, the unfolding pathways diverge. In the open state, the unfolding of β-hairpin V in one step precedes the unfolding of β-hairpin VI. In the closed state, β-hairpin V and β-strand S11 with a part of extracellular loop L6 unfold cooperatively, and subsequently β-strand S12 unfolds with the remaining loop L6. These two unfolding pathways in the open and closed states join again in the last unfolding step of β-hairpin VII. Also, the conformational change from the open to the closed state witnesses a rigidified extracellular gating loop L6. Thus, a change in the conformational state of OmpG not only bifurcates its unfolding pathways but also tunes its mechanical properties for optimum function.

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Year:  2010        PMID: 21058339     DOI: 10.1002/pmic.201000241

Source DB:  PubMed          Journal:  Proteomics        ISSN: 1615-9853            Impact factor:   3.984


  6 in total

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Journal:  Algorithms Mol Biol       Date:  2011-06-06       Impact factor: 1.405

5.  The non-bilayer lipid MGDG stabilizes the major light-harvesting complex (LHCII) against unfolding.

Authors:  Dennis Seiwert; Hannes Witt; Andreas Janshoff; Harald Paulsen
Journal:  Sci Rep       Date:  2017-07-11       Impact factor: 4.379

6.  Molecular Plasticity of the Human Voltage-Dependent Anion Channel Embedded Into a Membrane.

Authors:  Lin Ge; Saskia Villinger; Stefania A Mari; Karin Giller; Christian Griesinger; Stefan Becker; Daniel J Müller; Markus Zweckstetter
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  6 in total

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