Literature DB >> 21055425

Regions of intrinsic disorder help identify a novel nuclear localization signal in Toxoplasma gondii histone acetyltransferase TgGCN5-B.

Stacy E Dixon1, Micah M Bhatti, Vladimir N Uversky, A Keith Dunker, William J Sullivan.   

Abstract

We have previously shown that protozoan parasites, such as Toxoplasma gondii, contain a high prevalence of intrinsically disordered regions in their predicted proteins. Here, we determine that both TgGCN5-family histone acetyltransferases (HATs) contain unusually high levels of intrinsic disorder. A previously identified basic-rich nuclear localization signal (NLS) in the N-terminus of TgGCN5-A is located within such a region of predicted disorder, but this NLS is not conserved in TgGCN5-B. We therefore analyzed the intrinsically disordered regions of TgGCN5-B for basic-rich sequences that could be indicative of a functional NLS, and this led to the identification of a novel NLS for TgGCN5-B, RPAENKKRGR. The functionality of the GCN5-B NLS was validated experimentally and has predictive value. These studies demonstrate that basic-rich sequences within regions predicted to be intrinsically disordered constitute criteria for a candidate NLS.
Copyright © 2010 Elsevier B.V. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 21055425      PMCID: PMC3005016          DOI: 10.1016/j.molbiopara.2010.10.009

Source DB:  PubMed          Journal:  Mol Biochem Parasitol        ISSN: 0166-6851            Impact factor:   1.759


  15 in total

1.  Cloning and characterization of a novel histone acetyltransferase homologue from the protozoan parasite Toxoplasma gondii reveals a distinct GCN5 family member.

Authors:  W J Sullivan; C K Smith
Journal:  Gene       Date:  2000-01-25       Impact factor: 3.688

2.  NLSdb: database of nuclear localization signals.

Authors:  Rajesh Nair; Phil Carter; Burkhard Rost
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

Review 3.  Flexible nets. The roles of intrinsic disorder in protein interaction networks.

Authors:  A Keith Dunker; Marc S Cortese; Pedro Romero; Lilia M Iakoucheva; Vladimir N Uversky
Journal:  FEBS J       Date:  2005-10       Impact factor: 5.542

4.  Histone acetylase GCN5 enters the nucleus via importin-alpha in protozoan parasite Toxoplasma gondii.

Authors:  Micah M Bhatti; William J Sullivan
Journal:  J Biol Chem       Date:  2004-12-09       Impact factor: 5.157

5.  Signal transduction via unstructured protein conduits.

Authors:  A Keith Dunker; Vladimir N Uversky
Journal:  Nat Chem Biol       Date:  2008-04       Impact factor: 15.040

6.  AT-hook motifs identified in a wide variety of DNA-binding proteins.

Authors:  L Aravind; D Landsman
Journal:  Nucleic Acids Res       Date:  1998-10-01       Impact factor: 16.971

7.  Structure and ligand of a histone acetyltransferase bromodomain.

Authors:  C Dhalluin; J E Carlson; L Zeng; C He; A K Aggarwal; M M Zhou
Journal:  Nature       Date:  1999-06-03       Impact factor: 49.962

8.  Pair of unusual GCN5 histone acetyltransferases and ADA2 homologues in the protozoan parasite Toxoplasma gondii.

Authors:  Micah M Bhatti; Meredith Livingston; Nandita Mullapudi; William J Sullivan
Journal:  Eukaryot Cell       Date:  2006-01

9.  Plasmodium falciparum histone acetyltransferase, a yeast GCN5 homologue involved in chromatin remodeling.

Authors:  Qi Fan; Lijia An; Liwang Cui
Journal:  Eukaryot Cell       Date:  2004-04

10.  The importance of intrinsic disorder for protein phosphorylation.

Authors:  Lilia M Iakoucheva; Predrag Radivojac; Celeste J Brown; Timothy R O'Connor; Jason G Sikes; Zoran Obradovic; A Keith Dunker
Journal:  Nucleic Acids Res       Date:  2004-02-11       Impact factor: 16.971

View more
  11 in total

Review 1.  Conditionally and transiently disordered proteins: awakening cryptic disorder to regulate protein function.

Authors:  Ursula Jakob; Richard Kriwacki; Vladimir N Uversky
Journal:  Chem Rev       Date:  2014-02-06       Impact factor: 60.622

2.  Nuclear actin-related protein is required for chromosome segregation in Toxoplasma gondii.

Authors:  Elena S Suvorova; Margaret M Lehmann; Stella Kratzer; Michael W White
Journal:  Mol Biochem Parasitol       Date:  2011-09-22       Impact factor: 1.759

3.  Type II Toxoplasma gondii KU80 knockout strains enable functional analysis of genes required for cyst development and latent infection.

Authors:  Barbara A Fox; Alejandra Falla; Leah M Rommereim; Tadakimi Tomita; Jason P Gigley; Corinne Mercier; Marie-France Cesbron-Delauw; Louis M Weiss; David J Bzik
Journal:  Eukaryot Cell       Date:  2011-04-29

4.  O-fucosylated glycoproteins form assemblies in close proximity to the nuclear pore complexes of Toxoplasma gondii.

Authors:  Giulia Bandini; John R Haserick; Edwin Motari; Dinkorma T Ouologuem; Sebastian Lourido; David S Roos; Catherine E Costello; Phillips W Robbins; John Samuelson
Journal:  Proc Natl Acad Sci U S A       Date:  2016-09-23       Impact factor: 11.205

5.  A novel GCN5b lysine acetyltransferase complex associates with distinct transcription factors in the protozoan parasite Toxoplasma gondii.

Authors:  Michael T Harris; Victoria Jeffers; Jennifer Martynowicz; Jason D True; Amber L Mosley; William J Sullivan
Journal:  Mol Biochem Parasitol       Date:  2019-08-02       Impact factor: 1.759

Review 6.  Toxoplasma histone acetylation remodelers as novel drug targets.

Authors:  Laura Vanagas; Victoria Jeffers; Silvina S Bogado; Maria C Dalmasso; William J Sullivan; Sergio O Angel
Journal:  Expert Rev Anti Infect Ther       Date:  2012-10       Impact factor: 5.091

7.  The molecular mechanism of nuclear transport revealed by atomic-scale measurements.

Authors:  Loren E Hough; Kaushik Dutta; Samuel Sparks; Deniz B Temel; Alia Kamal; Jaclyn Tetenbaum-Novatt; Michael P Rout; David Cowburn
Journal:  Elife       Date:  2015-09-15       Impact factor: 8.140

8.  Lysine acetyltransferase GCN5b interacts with AP2 factors and is required for Toxoplasma gondii proliferation.

Authors:  Jiachen Wang; Stacy E Dixon; Li-Min Ting; Ting-Kai Liu; Victoria Jeffers; Matthew M Croken; Myrasol Calloway; Dominique Cannella; Mohamed Ali Hakimi; Kami Kim; William J Sullivan
Journal:  PLoS Pathog       Date:  2014-01-02       Impact factor: 6.823

9.  A transducible nuclear/nucleolar protein, mLLP, regulates neuronal morphogenesis and synaptic transmission.

Authors:  Nam-Kyung Yu; Hyoung F Kim; Jaehoon Shim; Somi Kim; Dae Won Kim; Chuljung Kwak; Su-Eon Sim; Jun-Hyeok Choi; Seohee Ahn; Juyoun Yoo; Sun-Lim Choi; Deok-Jin Jang; Chae-Seok Lim; Yong-Seok Lee; Chulhun Kang; Soo Young Choi; Bong-Kiun Kaang
Journal:  Sci Rep       Date:  2016-03-10       Impact factor: 4.379

10.  Fibrillarin Ribonuclease Activity is Dependent on the GAR Domain and Modulated by Phospholipids.

Authors:  Francisco Guillen-Chable; Ulises Rodríguez Corona; Alejandro Pereira-Santana; Andrea Bayona; Luis Carlos Rodríguez-Zapata; Cecilia Aquino; Lenka Šebestová; Nicolas Vitale; Pavel Hozak; Enrique Castano
Journal:  Cells       Date:  2020-05-06       Impact factor: 6.600

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.