Literature DB >> 21052657

Soil microbial diversity in the vicinity of a Negev Desert shrub--Reaumuria negevensis.

Vered Saul-Tcherkas1, Yosef Steinberger.   

Abstract

The Negev Desert is characterized by low soil-water availability and organic matter content, as well as important factors significantly influencing soil biological activity. In order to overcome the xeric environment, plant and soil biota have evolutionarily developed, over time, ecophysiological abilities that help them fulfill their biological role and function. Microorganisms are known as a major part of the ecosystem's total biomass and play an important role in decomposition processes and the nutrient cycle. Perennial shrubs have been found to play an important role as organic matter suppliers and as a physical barrier prolonging biological activity of microbial communities. Soil samples were collected monthly, from November 2006 to November 2007, from a 0 to 10-cm depth under the canopies of Reaumuria negevensis and from open areas (control) in order to evaluate abiotic components and microbial variables on a temporal basis. H' values, evenness, and β diversity (Sørensen's similarity) were determined by a molecular method based on sequencing. Water availability, organic matter content, and total soluble nitrogen were higher in soil samples collected in the vicinity of R. negevensis than in samples collected in open areas. Our study also indicated that, in spite of the similarity between H' values of soil samples collected in the vicinity of R. negevensis and the open area, a low percentage of similarity was found between the soil bacterial populations. These results support the hypothesis that distribution of resources in the environment under R. negevensis shrubs varies in space and time and also influences soil microbial diversity and the abiotic environmental role.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 21052657     DOI: 10.1007/s00248-010-9763-x

Source DB:  PubMed          Journal:  Microb Ecol        ISSN: 0095-3628            Impact factor:   4.552


  26 in total

1.  Acidobacteria form a coherent but highly diverse group within the bacterial domain: evidence from environmental genomics.

Authors:  Achim Quaiser; Torsten Ochsenreiter; Christa Lanz; Stephan C Schuster; Alexander H Treusch; Jürgen Eck; Christa Schleper
Journal:  Mol Microbiol       Date:  2003-10       Impact factor: 3.501

Review 2.  The use of microorganisms in ecological soil classification and assessment concepts.

Authors:  Anne Winding; Kerstin Hund-Rinke; Michiel Rutgers
Journal:  Ecotoxicol Environ Saf       Date:  2005-10       Impact factor: 6.291

3.  Preliminary investigations on inducing salt tolerance in maize through inoculation with rhizobacteria containing ACC deaminase activity.

Authors:  Sajid Mahmood Nadeem; Zahir Ahmad Zahir; Muhammad Naveed; Muhammad Arshad
Journal:  Can J Microbiol       Date:  2007-10       Impact factor: 2.419

4.  The composition of fluorescent pseudomonad populations associated with roots is influenced by plant and soil type.

Authors:  X Latour; T Corberand; G Laguerre; F Allard; P Lemanceau
Journal:  Appl Environ Microbiol       Date:  1996-07       Impact factor: 4.792

5.  Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils.

Authors:  Naomi L Ward; Jean F Challacombe; Peter H Janssen; Bernard Henrissat; Pedro M Coutinho; Martin Wu; Gary Xie; Daniel H Haft; Michelle Sait; Jonathan Badger; Ravi D Barabote; Brent Bradley; Thomas S Brettin; Lauren M Brinkac; David Bruce; Todd Creasy; Sean C Daugherty; Tanja M Davidsen; Robert T DeBoy; J Chris Detter; Robert J Dodson; A Scott Durkin; Anuradha Ganapathy; Michelle Gwinn-Giglio; Cliff S Han; Hoda Khouri; Hajnalka Kiss; Sagar P Kothari; Ramana Madupu; Karen E Nelson; William C Nelson; Ian Paulsen; Kevin Penn; Qinghu Ren; M J Rosovitz; Jeremy D Selengut; Susmita Shrivastava; Steven A Sullivan; Roxanne Tapia; L Sue Thompson; Kisha L Watkins; Qi Yang; Chunhui Yu; Nikhat Zafar; Liwei Zhou; Cheryl R Kuske
Journal:  Appl Environ Microbiol       Date:  2009-02-05       Impact factor: 4.792

6.  The microbial loop concept as used in terrestrial soil ecology studies.

Authors:  D C Coleman
Journal:  Microb Ecol       Date:  1994-09       Impact factor: 4.552

7.  Phylogenetic diversity of a bacterial community determined from Siberian tundra soil DNA.

Authors:  Jizhong Zhou; Mary Ellen Davey; Jordi B Figueras; Elizaveta Rivkina; David Gilichinsky; James M Tiedje
Journal:  Microbiology (Reading)       Date:  1997-12       Impact factor: 2.777

8.  Bacterial Community Structure in Relation to the Carbon Environments in Lettuce and Tomato Rhizospheres and in Bulk Soil

Authors: 
Journal:  Microb Ecol       Date:  1997-09       Impact factor: 4.552

9.  Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: plant-dependent enrichment and seasonal shifts revealed.

Authors:  K Smalla; G Wieland; A Buchner; A Zock; J Parzy; S Kaiser; N Roskot; H Heuer; G Berg
Journal:  Appl Environ Microbiol       Date:  2001-10       Impact factor: 4.792

10.  Patterns of diversity in plant and soil microbial communities along a productivity gradient in a Michigan old-field.

Authors:  L C Broughton; K L Gross
Journal:  Oecologia       Date:  2000-11-01       Impact factor: 3.225

View more
  10 in total

1.  The effect of resource islands on abundance and diversity of bacteria in arid soils.

Authors:  Ami Bachar; M Ines M Soares; Osnat Gillor
Journal:  Microb Ecol       Date:  2011-10-29       Impact factor: 4.552

2.  Bacterial diversity and community structure in the rhizosphere of the halophyte Halocnemum strobilaceum in an Algerian arid saline soil.

Authors:  Thierry Heulin; Yahia Kaci; Sabrina Behairi; Nassima Baha; Mohamed Barakat; Philippe Ortet; Wafa Achouak
Journal:  Extremophiles       Date:  2022-06-02       Impact factor: 2.395

3.  The role of pre-symbiotic auxin signaling in ectendomycorrhiza formation between the desert truffle Terfezia boudieri and Helianthemum sessiliflorum.

Authors:  Tidhar Turgeman; Olga Lubinsky; Nurit Roth-Bejerano; Varda Kagan-Zur; Yoram Kapulnik; Hinanit Koltai; Eli Zaady; Shimon Ben-Shabat; Ofer Guy; Efraim Lewinsohn; Yaron Sitrit
Journal:  Mycorrhiza       Date:  2015-11-12       Impact factor: 3.387

4.  Habitat-specific type I polyketide synthases in soils and street sediments.

Authors:  Patrick Hill; Jörn Piel; Stéphane Aris-Brosou; Václav Krištůfek; Christopher N Boddy; Lubbert Dijkhuizen
Journal:  J Ind Microbiol Biotechnol       Date:  2013-11-16       Impact factor: 3.346

5.  Desert farming benefits from microbial potential in arid soils and promotes diversity and plant health.

Authors:  Martina Köberl; Henry Müller; Elshahat M Ramadan; Gabriele Berg
Journal:  PLoS One       Date:  2011-09-02       Impact factor: 3.240

Review 6.  Sampling Terrestrial Environments for Bacterial Polyketides.

Authors:  Patrick Hill; Graham W Heberlig; Christopher N Boddy
Journal:  Molecules       Date:  2017-04-29       Impact factor: 4.411

7.  Impact of chlorine dioxide disinfection of irrigation water on the epiphytic bacterial community of baby spinach and underlying soil.

Authors:  Pilar Truchado; María Isabel Gil; Trevor Suslow; Ana Allende
Journal:  PLoS One       Date:  2018-07-18       Impact factor: 3.240

8.  Distinct soil bacterial communities revealed under a diversely managed agroecosystem.

Authors:  Raymon S Shange; Ramble O Ankumah; Abasiofiok M Ibekwe; Robert Zabawa; Scot E Dowd
Journal:  PLoS One       Date:  2012-07-23       Impact factor: 3.240

9.  Transcriptomic analysis of a tertiary relict plant, extreme xerophyte Reaumuria soongorica to identify genes related to drought adaptation.

Authors:  Yong Shi; Xia Yan; Pengshan Zhao; Hengxia Yin; Xin Zhao; Honglang Xiao; Xinrong Li; Guoxiong Chen; Xiao-Fei Ma
Journal:  PLoS One       Date:  2013-05-23       Impact factor: 3.240

10.  Spatial Variability of Microbial Communities and Salt Distributions Across a Latitudinal Aridity Gradient in the Atacama Desert.

Authors:  Jianxun Shen; Adam J Wyness; Mark W Claire; Aubrey L Zerkle
Journal:  Microb Ecol       Date:  2021-01-13       Impact factor: 4.552

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.