Literature DB >> 21051334

Systemic splicing factor deficiency causes tissue-specific defects: a zebrafish model for retinitis pigmentosa.

Bastian Linder1, Holger Dill, Anja Hirmer, Jan Brocher, Gek Ping Lee, Sinnakaruppan Mathavan, Hanno Jörn Bolz, Christoph Winkler, Bernhard Laggerbauer, Utz Fischer.   

Abstract

Retinitis pigmentosa (RP) is a common hereditary eye disease that causes blindness due to a progressive loss of photoreceptors in the retina. RP can be elicited by mutations that affect the tri-snRNP subunit of the pre-mRNA splicing machinery, but how defects in this essential macromolecular complex transform into a photoreceptor-specific phenotype is unknown. We have modeled the disease in zebrafish by silencing the RP-associated splicing factor Prpf31 and observed detrimental effects on visual function and photoreceptor morphology. Despite reducing the level of a constitutive splicing factor, no general defects in gene expression were found. Instead, retinal genes were selectively affected, providing the first in vivo link between mutations in splicing factors and the RP phenotype. Silencing of Prpf4, a splicing factor hitherto unrelated to RP, evoked the same defects in vision, photoreceptor morphology and retinal gene expression. Hence, various routes affecting the tri-snRNP can elicit tissue-specific gene expression defects and lead to the RP phenotype.

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Year:  2010        PMID: 21051334     DOI: 10.1093/hmg/ddq473

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  30 in total

1.  Incomplete splicing of neutrophil-specific genes affects neutrophil development in a zebrafish model of poikiloderma with neutropenia.

Authors:  Prakash Patil; Tamayo Uechi; Naoya Kenmochi
Journal:  RNA Biol       Date:  2015       Impact factor: 4.652

Review 2.  Anakinra as an interleukin 1 receptor antagonist, complicated genetics and molecular impacts--from the point of view of mouse genomics.

Authors:  Yanhong Cao; Yan Jiao; Lishi Wang; Yue Huang; Arnold Postlethwaite; John Stuart; Andy Kang; Robert W Williams; Weikuan Gu
Journal:  Int Immunopharmacol       Date:  2012-03-14       Impact factor: 4.932

Review 3.  Functional architecture of the retina: development and disease.

Authors:  Mrinalini Hoon; Haruhisa Okawa; Luca Della Santina; Rachel O L Wong
Journal:  Prog Retin Eye Res       Date:  2014-06-28       Impact factor: 21.198

4.  Intronic miR-26b controls neuronal differentiation by repressing its host transcript, ctdsp2.

Authors:  Holger Dill; Bastian Linder; Alexander Fehr; Utz Fischer
Journal:  Genes Dev       Date:  2012-01-01       Impact factor: 11.361

5.  Sf3b4-depleted Xenopus embryos: A model to study the pathogenesis of craniofacial defects in Nager syndrome.

Authors:  Arun Devotta; Hugo Juraver-Geslin; Jose Antonio Gonzalez; Chang-Soo Hong; Jean-Pierre Saint-Jeannet
Journal:  Dev Biol       Date:  2016-02-11       Impact factor: 3.582

6.  PRPF mutations are associated with generalized defects in spliceosome formation and pre-mRNA splicing in patients with retinitis pigmentosa.

Authors:  Goranka Tanackovic; Adriana Ransijn; Philippe Thibault; Sherif Abou Elela; Roscoe Klinck; Eliot L Berson; Benoit Chabot; Carlo Rivolta
Journal:  Hum Mol Genet       Date:  2011-03-05       Impact factor: 6.150

7.  RNA Splicing Factor Mutations That Cause Retinitis Pigmentosa Result in Circadian Dysregulation.

Authors:  Iryna Shakhmantsir; Scott J Dooley; Siddharth Kishore; Dechun Chen; Eric Pierce; Jean Bennett; Amita Sehgal
Journal:  J Biol Rhythms       Date:  2019-11-15       Impact factor: 3.182

8.  RNA-Seq analysis in mutant zebrafish reveals role of U1C protein in alternative splicing regulation.

Authors:  Tanja Dorothe Rösel; Lee-Hsueh Hung; Jan Medenbach; Katrin Donde; Stefan Starke; Vladimir Benes; Gunnar Rätsch; Albrecht Bindereif
Journal:  EMBO J       Date:  2011-04-05       Impact factor: 11.598

9.  Mutations in SNRPE, which encodes a core protein of the spliceosome, cause autosomal-dominant hypotrichosis simplex.

Authors:  Sandra M Pasternack; Melanie Refke; Elham Paknia; Hans Christian Hennies; Thomas Franz; Niklas Schäfer; Alan Fryer; Maurice van Steensel; Elizabeth Sweeney; Miquel Just; Clemens Grimm; Roland Kruse; Carlos Ferrándiz; Markus M Nöthen; Utz Fischer; Regina C Betz
Journal:  Am J Hum Genet       Date:  2012-12-13       Impact factor: 11.025

10.  In vivo mutation of pre-mRNA processing factor 8 (Prpf8) affects transcript splicing, cell survival and myeloid differentiation.

Authors:  Maria-Cristina Keightley; Meredith O Crowhurst; Judith E Layton; Traude Beilharz; Sebastian Markmiller; Sony Varma; Benjamin M Hogan; Tanya A de Jong-Curtain; Joan K Heath; Graham J Lieschke
Journal:  FEBS Lett       Date:  2013-05-25       Impact factor: 4.124

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