Literature DB >> 21047698

A genomic view of 500 million years of cnidarian evolution.

Robert E Steele1, Charles N David, Ulrich Technau.   

Abstract

Cnidarians (corals, anemones, jellyfish and hydras) are a diverse group of animals of interest to evolutionary biologists, ecologists and developmental biologists. With the publication of the genome sequences of Hydra and Nematostella, whose last common ancestor was the stem cnidarian, researchers are beginning to see the genomic underpinnings of cnidarian biology. Cnidarians are known for the remarkable plasticity of their morphology and life cycles. This plasticity is reflected in the Hydra and Nematostella genomes, which differ to an exceptional degree in size, base composition, transposable element content and gene conservation. It is now known what cnidarian genomes, given 500 million years, are capable of; as we discuss here, the next challenge is to understand how this genomic history has led to the striking diversity seen in this group.
Copyright © 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 21047698      PMCID: PMC3058326          DOI: 10.1016/j.tig.2010.10.002

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  91 in total

Review 1.  The genesis and evolution of homeobox gene clusters.

Authors:  Jordi Garcia-Fernàndez
Journal:  Nat Rev Genet       Date:  2005-12       Impact factor: 53.242

Review 2.  Operons in eukaryotes.

Authors:  Thomas Blumenthal
Journal:  Brief Funct Genomic Proteomic       Date:  2004-11

3.  Molecular phylogenetics in Hydra, a classical model in evolutionary developmental biology.

Authors:  Georg Hemmrich; Boris Anokhin; Helmut Zacharias; Thomas C G Bosch
Journal:  Mol Phylogenet Evol       Date:  2006-11-07       Impact factor: 4.286

4.  Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization.

Authors:  Nicholas H Putnam; Mansi Srivastava; Uffe Hellsten; Bill Dirks; Jarrod Chapman; Asaf Salamov; Astrid Terry; Harris Shapiro; Erika Lindquist; Vladimir V Kapitonov; Jerzy Jurka; Grigory Genikhovich; Igor V Grigoriev; Susan M Lucas; Robert E Steele; John R Finnerty; Ulrich Technau; Mark Q Martindale; Daniel S Rokhsar
Journal:  Science       Date:  2007-07-06       Impact factor: 47.728

Review 5.  Axial patterning in hydra.

Authors:  Hans R Bode
Journal:  Cold Spring Harb Perspect Biol       Date:  2009-07       Impact factor: 10.005

6.  Systematic isolation of peptide signal molecules regulating development in hydra: LWamide and PW families.

Authors:  T Takahashi; Y Muneoka; J Lohmann; M S Lopez de Haro; G Solleder; T C Bosch; C N David; H R Bode; O Koizumi; H Shimizu; M Hatta; T Fujisawa; T Sugiyama
Journal:  Proc Natl Acad Sci U S A       Date:  1997-02-18       Impact factor: 11.205

7.  The starlet sea anemone Nematostella vectensis: an anthozoan model organism for studies in comparative genomics and functional evolutionary developmental biology.

Authors:  Grigory Genikhovich; Ulrich Technau
Journal:  Cold Spring Harb Protoc       Date:  2009-09

Review 8.  Rising starlet: the starlet sea anemone, Nematostella vectensis.

Authors:  John A Darling; Adam R Reitzel; Patrick M Burton; Maureen E Mazza; Joseph F Ryan; James C Sullivan; John R Finnerty
Journal:  Bioessays       Date:  2005-02       Impact factor: 4.345

9.  Anatomy and development of the nervous system of Nematostella vectensis, an anthozoan cnidarian.

Authors:  Heather Q Marlow; Mansi Srivastava; David Q Matus; Daniel Rokhsar; Mark Q Martindale
Journal:  Dev Neurobiol       Date:  2009-03       Impact factor: 3.964

10.  Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals.

Authors:  Andrew Grimson; Mansi Srivastava; Bryony Fahey; Ben J Woodcroft; H Rosaria Chiang; Nicole King; Bernard M Degnan; Daniel S Rokhsar; David P Bartel
Journal:  Nature       Date:  2008-10-01       Impact factor: 49.962

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  36 in total

Review 1.  Evolutionary crossroads in developmental biology: Cnidaria.

Authors:  Ulrich Technau; Robert E Steele
Journal:  Development       Date:  2011-03-09       Impact factor: 6.868

Review 2.  Old cell, new trick? Cnidocytes as a model for the evolution of novelty.

Authors:  Leslie S Babonis; Mark Q Martindale
Journal:  Integr Comp Biol       Date:  2014-04-25       Impact factor: 3.326

3.  Meganuclease-assisted generation of stable transgenics in the sea anemone Nematostella vectensis.

Authors:  Eduard Renfer; Ulrich Technau
Journal:  Nat Protoc       Date:  2017-08-17       Impact factor: 13.491

Review 4.  The state of Medusozoa genomics: current evidence and future challenges.

Authors:  Mylena D Santander; Maximiliano M Maronna; Joseph F Ryan; Sónia C S Andrade
Journal:  Gigascience       Date:  2022-05-17       Impact factor: 7.658

5.  A unique covalent bond in basement membrane is a primordial innovation for tissue evolution.

Authors:  Aaron L Fidler; Roberto M Vanacore; Sergei V Chetyrkin; Vadim K Pedchenko; Gautam Bhave; Viravuth P Yin; Cody L Stothers; Kristie Lindsey Rose; W Hayes McDonald; Travis A Clark; Dorin-Bogdan Borza; Robert E Steele; Michael T Ivy; Julie K Hudson; Billy G Hudson
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-16       Impact factor: 11.205

Review 6.  Stem cell dynamics in Cnidaria: are there unifying principles?

Authors:  David A Gold; David K Jacobs
Journal:  Dev Genes Evol       Date:  2012-11-21       Impact factor: 0.900

7.  The cytochrome P450 (CYP) superfamily in cnidarians.

Authors:  Kirill V Pankov; Andrew G McArthur; David A Gold; David R Nelson; Jared V Goldstone; Joanna Y Wilson
Journal:  Sci Rep       Date:  2021-05-10       Impact factor: 4.379

8.  Venom proteome of the box jellyfish Chironex fleckeri.

Authors:  Diane L Brinkman; Ammar Aziz; Alex Loukas; Jeremy Potriquet; Jamie Seymour; Jason Mulvenna
Journal:  PLoS One       Date:  2012-12-07       Impact factor: 3.240

9.  Morphological and molecular analysis of the Nematostella vectensis cnidom.

Authors:  Claudia Zenkert; Toshio Takahashi; Mark-Oliver Diesner; Suat Özbek
Journal:  PLoS One       Date:  2011-07-28       Impact factor: 3.240

10.  Cross-species analysis reveals evolving and conserved features of the nuclear factor κB (NF-κB) proteins.

Authors:  Grigory Ryzhakov; Ana Teixeira; David Saliba; Katrina Blazek; Tatsushi Muta; Jiannis Ragoussis; Irina A Udalova
Journal:  J Biol Chem       Date:  2013-03-18       Impact factor: 5.157

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