Literature DB >> 21030822

Rheinheimera aquatica sp. nov., an antimicrobial activity producing bacterium isolated from freshwater culture pond.

Wen-Ming Chen1, Chang-Yi Lin, Chiu-Chung Young, Shih-Yi Sheu.   

Abstract

A bacterial strain designated GR5(T) was isolated from freshwater culture pond in Taiwan during the screening of bacteria for antimicrobial compounds and characterized using the polyphasic taxonomic approach. Strain GR5(T) was Gram-negative, aerobic, greenish-yellow colored, rod-shaped, and motile by means of a polar single flagellum. Growth occurred at 10-40 degrees C (optimum, 35 degrees C), at pH 7.0-8.0 (optimum pH 8.0) and with 0-2.0% NaCl (optimum, 0.5-1.0%). The major fatty acids were C(16:1) omega7c (36.3%), C(16:0) (16.6%), C(12:0) 3-OH (12.5%) and C(18:1) omega7c (9.1%). The major respiratory quinone was Q-8. The DNA G+C content of the genomic DNA was 51.9 mol%. Phylogenetic analyses based on 16S rRNA gene sequences showed that strain GR5(T) belonged to the genus Rheinheimera and its most closely neighbours were Rheinheimera texasensis A62-14B(T) and Rheinheimera tangshanensis JA3-B52(T) with sequence similarities of 98.1 and 97.5%, respectively. The sequence similarities to any other recognized species within Gammaproteobacteria were less than 96.5%. The mean level of DNA-DNA relatedness between strain GR5(T) and R. texasensis A62-14B(T), the strain most closely related to the isolate, was 26.5 +/- 7.6 %. On the basis of the phylogenetic and phenotypic data, strain GR5(T) should be classified as representing a novel species, for which the name Rheinheimera aquatica sp. nov. is proposed. The type strain is GR5(T) (= BCRC 80081(T) = LMG 25379(T)).

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 21030822     DOI: 10.4014/jmb.1004.04048

Source DB:  PubMed          Journal:  J Microbiol Biotechnol        ISSN: 1017-7825            Impact factor:   2.351


  8 in total

1.  Genome sequence of Rheinheimera sp. strain A13L, isolated from Pangong Lake, India.

Authors:  Hemant Kumar Gupta; Rinkoo Devi Gupta; Ajit Singh; Nar Singh Chauhan; Rakesh Sharma
Journal:  J Bacteriol       Date:  2011-07-08       Impact factor: 3.490

2.  Rheinheimera pleomorphica sp. nov., a Novel Alkali-Tolerant Bacteria Isolated from Chilika Lake, India.

Authors:  Ananta N Panda; Lopamudra Ray; Samir Ranjan Mishra; Vishakha Raina
Journal:  Curr Microbiol       Date:  2019-11-08       Impact factor: 2.188

3.  Rheinheimera gaetbuli sp. nov., a Marine Bacterium Isolated from a Tidal Flat.

Authors:  Kyunghwa Baek; Che Ok Jeon
Journal:  Curr Microbiol       Date:  2015-12-11       Impact factor: 2.188

4.  Distribution in microbial genomes of genes similar to lodA and goxA which encode a novel family of quinoproteins with amino acid oxidase activity.

Authors:  Jonatan C Campillo-Brocal; María Dolores Chacón-Verdú; Patricia Lucas-Elío; Antonio Sánchez-Amat
Journal:  BMC Genomics       Date:  2015-03-24       Impact factor: 3.969

5.  Inter individual variations of the fish skin microbiota: host genetics basis of mutualism?

Authors:  Sébastien Boutin; Christopher Sauvage; Louis Bernatchez; Céline Audet; Nicolas Derome
Journal:  PLoS One       Date:  2014-07-28       Impact factor: 3.240

6.  Genomic and Seasonal Variations among Aquatic Phages Infecting the Baltic Sea Gammaproteobacterium Rheinheimera sp. Strain BAL341.

Authors:  E Nilsson; K Li; J Fridlund; S Šulčius; C Bunse; C M G Karlsson; M Lindh; D Lundin; J Pinhassi; K Holmfeldt
Journal:  Appl Environ Microbiol       Date:  2019-08-29       Impact factor: 4.792

7.  Draft Genome Sequence of Rheinheimera sp. Strain SA_1 Isolated from Iron Backwash Sludge in Germany.

Authors:  Josephin Schröder; Burga Braun; Karsten Liere; Ulrich Szewzyk
Journal:  Genome Announc       Date:  2016-08-18

8.  Microbial community structure of two freshwater sponges using Illumina MiSeq sequencing revealed high microbial diversity.

Authors:  Swapnil Gaikwad; Yogesh S Shouche; Wasudev N Gade
Journal:  AMB Express       Date:  2016-06-14       Impact factor: 3.298

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.