Literature DB >> 21030426

Genetic variations in Tibetan populations and high-altitude adaptation at the Himalayas.

Yi Peng1, Zhaohui Yang, Hui Zhang, Chaoying Cui, Xuebin Qi, Xiongjian Luo, Xiang Tao, Tianyi Wu, Hua Chen, Hong Shi, Bing Su.   

Abstract

Modern humans have occupied almost all possible environments globally since exiting Africa about 100,000 years ago. Both behavioral and biological adaptations have contributed to their success in surviving the rigors of climatic extremes, including cold, strong ultraviolet radiation, and high altitude. Among these environmental stresses, high-altitude hypoxia is the only condition in which traditional technology is incapable of mediating its effects. Inhabiting at >3,000-m high plateau, the Tibetan population provides a widely studied example of high-altitude adaptation. Yet, the genetic mechanisms underpinning long-term survival in this environmental extreme remain unknown. We performed an analysis of genome-wide sequence variations in Tibetans. In combination with the reported data, we identified strong signals of selective sweep in two hypoxia-related genes, EPAS1 and EGLN1. For these two genes, Tibetans show unusually high divergence from the non-Tibetan lowlanders (Han Chinese and Japanese) and possess high frequencies of many linked sequence variations as reflected by the Tibetan-specific haplotypes. Further analysis in seven Tibetan populations (1,334 individuals) indicates the prevalence of selective sweep across the Himalayan region. The observed indicators of natural selection on EPAS1 and EGLN1 suggest that during the long-term occupation of high-altitude areas, the functional sequence variations for acquiring biological adaptation to high-altitude hypoxia have been enriched in Tibetan populations.

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Year:  2010        PMID: 21030426     DOI: 10.1093/molbev/msq290

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  140 in total

1.  Metabolic insight into mechanisms of high-altitude adaptation in Tibetans.

Authors:  Ri-Li Ge; Tatum S Simonson; Robert C Cooksey; Uran Tanna; Ga Qin; Chad D Huff; David J Witherspoon; Jinchuan Xing; Bai Zhengzhong; Josef T Prchal; Lynn B Jorde; Donald A McClain
Journal:  Mol Genet Metab       Date:  2012-03-17       Impact factor: 4.797

Review 2.  Oxygen levels and the regulation of cell adhesion in the nervous system: a control point for morphogenesis in development, disease and evolution?

Authors:  Kathryn L Crossin
Journal:  Cell Adh Migr       Date:  2012 Jan-Feb       Impact factor: 3.405

Review 3.  Population genetic studies in the genomic sequencing era.

Authors:  Hua Chen
Journal:  Dongwuxue Yanjiu       Date:  2015-07-18

Review 4.  Genetic determinants of Tibetan high-altitude adaptation.

Authors:  Tatum S Simonson; Donald A McClain; Lynn B Jorde; Josef T Prchal
Journal:  Hum Genet       Date:  2011-11-09       Impact factor: 4.132

5.  Widespread signals of convergent adaptation to high altitude in Asia and america.

Authors:  Matthieu Foll; Oscar E Gaggiotti; Josephine T Daub; Alexandra Vatsiou; Laurent Excoffier
Journal:  Am J Hum Genet       Date:  2014-09-25       Impact factor: 11.025

Review 6.  Altitude Adaptation: A Glimpse Through Various Lenses.

Authors:  Tatum S Simonson
Journal:  High Alt Med Biol       Date:  2015-06       Impact factor: 1.981

Review 7.  Genetic approaches in comparative and evolutionary physiology.

Authors:  Jay F Storz; Jamie T Bridgham; Scott A Kelly; Theodore Garland
Journal:  Am J Physiol Regul Integr Comp Physiol       Date:  2015-06-03       Impact factor: 3.619

Review 8.  The genetic basis of chronic mountain sickness.

Authors:  Roy Ronen; Dan Zhou; Vineet Bafna; Gabriel G Haddad
Journal:  Physiology (Bethesda)       Date:  2014-11

9.  Characterising private and shared signatures of positive selection in 37 Asian populations.

Authors:  Xuanyao Liu; Dongsheng Lu; Woei-Yuh Saw; Philip J Shaw; Pongsakorn Wangkumhang; Chumpol Ngamphiw; Suthat Fucharoen; Worachart Lert-Itthiporn; Kwanrutai Chin-Inmanu; Tran Nguyen Bich Chau; Katie Anders; Anuradhani Kasturiratne; H Janaka de Silva; Tomohiro Katsuya; Ryosuke Kimura; Toru Nabika; Takayoshi Ohkubo; Yasuharu Tabara; Fumihiko Takeuchi; Ken Yamamoto; Mitsuhiro Yokota; Dolikun Mamatyusupu; Wenjun Yang; Yeun-Jun Chung; Li Jin; Boon-Peng Hoh; Ananda R Wickremasinghe; RickTwee-Hee Ong; Chiea-Chuen Khor; Sarah J Dunstan; Cameron Simmons; Sissades Tongsima; Prapat Suriyaphol; Norihiro Kato; Shuhua Xu; Yik-Ying Teo
Journal:  Eur J Hum Genet       Date:  2017-01-18       Impact factor: 4.246

Review 10.  Measuring high-altitude adaptation.

Authors:  Lorna G Moore
Journal:  J Appl Physiol (1985)       Date:  2017-08-31
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