Literature DB >> 21030228

Gene silencing of the Lentinula edodes lcc1 gene by expression of a homologous inverted repeat sequence.

Keiko Nakade1, Hisayuki Watanabe, Yuichi Sakamoto, Toshitsugu Sato.   

Abstract

Lentinula edodes is one of the most important edible mushrooms, but no method for analyzing its molecular genetics has yet been established. RNA interference (RNAi) is a mechanism that inhibits expression of specific genes at the post-transcriptional stage and has been used to analyze the genetics of several fungal species. RNAi was used to examine the expression of the laccase (EC 1.10.3.2) gene lcc1 of L. edodes, which encodes a lignin-degrading enzyme. Vector pChG'-ivrL1 that expressed a 40 bp homologous inverted repeat sequence from lcc1 was constructed. This was transformed into L. edodes using the restriction enzyme mediated integration method (REMI). Lcc1 protein was not detected in two of 57 transformants (ivrL1#26, ivrL1#32) where the lcc1 transcription levels were suppressed. Thus, a 40 bp inverted repeat sequence expression vector suppressed expression of the target gene in L. edodes. Lcc1 downregulated transformants (ivrL1#32) did not form a thick aerial mycelium mat on agar medium. Electron microscopy showed hyphae of ivrL1#32 had many short branches with low mycelial density, a thin cell wall, and few fibrous layers as compared to the host strain. These morphological phenotypes would be caused by the absence of Lcc1, and that provides some clue to resolve the biological function of Lcc1 in L. edodes. Our results show that RNAi can be used for gene silencing in L. edodes.
Copyright © 2010 Elsevier GmbH. All rights reserved.

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Year:  2010        PMID: 21030228     DOI: 10.1016/j.micres.2010.09.004

Source DB:  PubMed          Journal:  Microbiol Res        ISSN: 0944-5013            Impact factor:   5.415


  10 in total

1.  Lentinula edodes Genome Survey and Postharvest Transcriptome Analysis.

Authors:  Yuichi Sakamoto; Keiko Nakade; Shiho Sato; Kentaro Yoshida; Kazuhiro Miyazaki; Satoshi Natsume; Naotake Konno
Journal:  Appl Environ Microbiol       Date:  2017-05-01       Impact factor: 4.792

2.  Coprinopsis cinerea Uses Laccase Lcc9 as a Defense Strategy To Eliminate Oxidative Stress during Fungal-Fungal Interactions.

Authors:  Juanjuan Liu; Can Peng; Qiqi Han; Mengyao Wang; Gang Zhou; Bin Ye; Yazhong Xiao; Zemin Fang; Ursula Kües
Journal:  Appl Environ Microbiol       Date:  2021-10-20       Impact factor: 5.005

3.  The development and application of a multiple gene co-silencing system using endogenous URA3 as a reporter gene in Ganoderma lucidum.

Authors:  Dashuai Mu; Liang Shi; Ang Ren; Mengjiao Li; Fengli Wu; Ailiang Jiang; Mingwen Zhao
Journal:  PLoS One       Date:  2012-08-24       Impact factor: 3.240

4.  detectIR: a novel program for detecting perfect and imperfect inverted repeats using complex numbers and vector calculation.

Authors:  Congting Ye; Guoli Ji; Lei Li; Chun Liang
Journal:  PLoS One       Date:  2014-11-19       Impact factor: 3.240

Review 5.  Current technologies and related issues for mushroom transformation.

Authors:  Sinil Kim; Byeong-Suk Ha; Hyeon-Su Ro
Journal:  Mycobiology       Date:  2015-03-31       Impact factor: 1.858

6.  Development of an RNA interference (RNAi) gene knockdown protocol in the anaerobic gut fungus Pecoramyces ruminantium strain C1A.

Authors:  Shelby S Calkins; Nicole C Elledge; Katherine E Mueller; Stephen M Marek; M B Couger; Mostafa S Elshahed; Noha H Youssef
Journal:  PeerJ       Date:  2018-01-30       Impact factor: 2.984

7.  Effects of Medium Composition and Genetic Background on Agrobacterium-Mediated Transformation Efficiency of Lentinula edodes.

Authors:  Lianlian Yan; Ruiping Xu; Yan Zhou; Yuhua Gong; Shenghong Dai; Haiyang Liu; Yinbing Bian
Journal:  Genes (Basel)       Date:  2019-06-19       Impact factor: 4.096

8.  A novel gene, Le-Dd10, is involved in fruiting body formation of Lentinula edodes.

Authors:  Akihiro Kishikawa; Satoshi Hamada; Ichiro Kamei; Yosuke Fujimoto; Kazuhiro Miyazaki; Motonobu Yoshida
Journal:  Arch Microbiol       Date:  2022-09-05       Impact factor: 2.667

9.  Grouping of multicopper oxidases in Lentinula edodes by sequence similarities and expression patterns.

Authors:  Yuichi Sakamoto; Keiko Nakade; Kentaro Yoshida; Satoshi Natsume; Kazuhiro Miyazaki; Shiho Sato; Arend F van Peer; Naotake Konno
Journal:  AMB Express       Date:  2015-09-17       Impact factor: 3.298

10.  Expression Profile of Laccase Gene Family in White-Rot Basidiomycete Lentinula edodes under Different Environmental Stresses.

Authors:  Lianlian Yan; Ruiping Xu; Yinbing Bian; Hongxian Li; Yan Zhou
Journal:  Genes (Basel)       Date:  2019-12-16       Impact factor: 4.096

  10 in total

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