Literature DB >> 20981757

Background determination-based detection of scattered peaks.

Armin Stroebel1, Oliver Welzel, Johannes Kornhuber, Teja W Groemer.   

Abstract

In many instances of signal and image processing, it is indispensable to precisely distinguish scattered peaks from a background, e.g., camera signals in microscopy. Here we addressed the detection of Gaussian signals in simulated line profiles (LP) comparable with e.g., fluorescence microscopy data. In a first step, we measured the applicability of histogram-based global background estimation. We find that the method is valid for typical scattered Gaussian signals if they are averagely separated by interpeak distances of 5.5 standard deviations. This enabled us to design global background determination-based peak detection (GBPD). GBPD was compared with two local background determination-based signal detection methods that had been designed for analysis of electrophysiological data and microscopy images, respectively. We were able to prove via receiver-operator characteristic (ROC) comparisons of signal-to-noise ratio (SNR), interpeak distance, and filtering behavior that, when applicable, GBPD brings advantages in knowledge needed a priori, performance at any SNR, controllability and spatial resolution.

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Year:  2010        PMID: 20981757     DOI: 10.1002/jemt.20858

Source DB:  PubMed          Journal:  Microsc Res Tech        ISSN: 1059-910X            Impact factor:   2.769


  5 in total

1.  A fast and robust method for automated analysis of axonal transport.

Authors:  Oliver Welzel; Jutta Knörr; Armin M Stroebel; Johannes Kornhuber; Teja W Groemer
Journal:  Eur Biophys J       Date:  2011-06-22       Impact factor: 1.733

2.  Synapse clusters are preferentially formed by synapses with large recycling pool sizes.

Authors:  Oliver Welzel; Carsten H Tischbirek; Jasmin Jung; Eva M Kohler; Alexei Svetlitchny; Andreas W Henkel; Johannes Kornhuber; Teja W Groemer
Journal:  PLoS One       Date:  2010-10-20       Impact factor: 3.240

3.  Key physiological parameters dictate triggering of activity-dependent bulk endocytosis in hippocampal synapses.

Authors:  Eva M Wenzel; Andrew Morton; Katrin Ebert; Oliver Welzel; Johannes Kornhuber; Michael A Cousin; Teja W Groemer
Journal:  PLoS One       Date:  2012-06-04       Impact factor: 3.240

4.  Feasibility and Diagnostic Accuracy of Ischemic Stroke Territory Recognition Based on Two-Dimensional Projections of Three-Dimensional Diffusion MRI Data.

Authors:  Jana Katharina Wrosch; Bastian Volbers; Philipp Gölitz; Daniel Frederic Gilbert; Stefan Schwab; Arnd Dörfler; Johannes Kornhuber; Teja Wolfgang Groemer
Journal:  Front Neurol       Date:  2015-11-19       Impact factor: 4.003

5.  Spot quantification in two dimensional gel electrophoresis image analysis: comparison of different approaches and presentation of a novel compound fitting algorithm.

Authors:  Jan M Brauner; Teja W Groemer; Armin Stroebel; Simon Grosse-Holz; Timo Oberstein; Jens Wiltfang; Johannes Kornhuber; Juan Manuel Maler
Journal:  BMC Bioinformatics       Date:  2014-06-11       Impact factor: 3.169

  5 in total

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