Literature DB >> 20979077

Amyloid assemblies: protein legos at a crossroads in bottom-up synthetic biology.

Rafael Giraldo1.   

Abstract

One of the major objectives that bottom-up synthetic biology shares with chemical biology is to engineer extant biological molecules to implement novel functionalities in living systems. Proteins, due to their astonishing structural and functional versatility and to their central roles in the biology of cells, should be cornerstones of synthetic biology. In particular, protein amyloid cross-β assemblies constitute one of the most stable, conceptually simple and universal macromolecular architectures ever found in Nature and thus have enormous potential to be explored. This article focuses on the concepts behind the use of the amyloid cross-β-structural framework as a synthetic biology part, underlining recent basic findings and ideas. The pros and the cons associated with the polymorphism and the cellular toxicity of protein amyloids are also discussed, keeping in mind the possible suitability of these protein assemblies for scaffolding novel orthogonal macromolecular devices in vivo.

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Year:  2010        PMID: 20979077     DOI: 10.1002/cbic.201000412

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  9 in total

1.  Self-assembled amyloid-like oligomeric-cohesin Scaffoldin for augmented protein display on the saccharomyces cerevisiae cell surface.

Authors:  Zhenlin Han; Bei Zhang; Yi E Wang; Yi Y Zuo; Wei Wen Su
Journal:  Appl Environ Microbiol       Date:  2012-02-17       Impact factor: 4.792

2.  RepA-WH1 prionoid: a synthetic amyloid proteinopathy in a minimalist host.

Authors:  Rafael Giraldo; Susana Moreno-Díaz de la Espina; M Elena Fernández-Tresguerres; Fátima Gasset-Rosa
Journal:  Prion       Date:  2011-04-01       Impact factor: 3.931

3.  Probing fibril dissolution of the repeat domain of a functional amyloid, Pmel17, on the microscopic and residue level.

Authors:  Ryan P McGlinchey; James M Gruschus; Attila Nagy; Jennifer C Lee
Journal:  Biochemistry       Date:  2011-11-17       Impact factor: 3.162

4.  Pre-amyloid oligomers of the proteotoxic RepA-WH1 prionoid assemble at the bacterial nucleoid.

Authors:  María Moreno-Del Álamo; Susana Moreno-Díaz de la Espina; M Elena Fernández-Tresguerres; Rafael Giraldo
Journal:  Sci Rep       Date:  2015-10-01       Impact factor: 4.379

5.  PASTA 2.0: an improved server for protein aggregation prediction.

Authors:  Ian Walsh; Flavio Seno; Silvio C E Tosatto; Antonio Trovato
Journal:  Nucleic Acids Res       Date:  2014-05-21       Impact factor: 16.971

6.  RepA-WH1, the agent of an amyloid proteinopathy in bacteria, builds oligomeric pores through lipid vesicles.

Authors:  Cristina Fernández; Rafael Núñez-Ramírez; Mercedes Jiménez; Germán Rivas; Rafael Giraldo
Journal:  Sci Rep       Date:  2016-03-17       Impact factor: 4.379

Review 7.  SynBio and the Boundaries between Functional and Pathogenic RepA-WH1 Bacterial Amyloids.

Authors:  Rafael Giraldo
Journal:  mSystems       Date:  2020-06-30       Impact factor: 6.496

Review 8.  Exploring Biomolecular Self-Assembly with Far-Infrared Radiation.

Authors:  Takayasu Kawasaki; Yuusuke Yamaguchi; Hideaki Kitahara; Akinori Irizawa; Masahiko Tani
Journal:  Biomolecules       Date:  2022-09-19

9.  RepA-WH1 prionoid: Clues from bacteria on factors governing phase transitions in amyloidogenesis.

Authors:  Rafael Giraldo; Cristina Fernández; María Moreno-del Álamo; Laura Molina-García; Aída Revilla-García; María Cruz Sánchez-Martínez; Juan F Giménez-Abián; Susana Moreno-Díaz de la Espina
Journal:  Prion       Date:  2016       Impact factor: 3.931

  9 in total

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