Literature DB >> 20976469

Synthetic lethal interactions for the development of cancer therapeutics: biological and methodological advancements.

Shinji Mizuarai1, Hidehito Kotani.   

Abstract

Synthetic lethal interaction is defined as a combination of two mutations that is lethal when present in the same cell; each individual mutation is non-lethal. Synthetic lethal interactions attract attention in cancer research fields since the discovery of synthetic lethal genes with either oncogenes or tumor suppressor genes (TSGs) provides novel cancer therapeutic targets. Due to the selective lethal effect on cancer cells harboring specific genetic alterations, it is expected that targeting synthetic lethal genes would provide wider therapeutic windows compared with cytotoxic chemotherapeutics. Here, we review the current status of the application of synthetic lethal screening in cancer research fields from biological and methodological viewpoints. Very recent studies seeking to identify synthetic lethal genes with K-RAS and p53, which are known to be the most frequently occurring oncogenes and TSGs, respectively, are introduced. Among the accumulating amount of research on synthetic lethal interactions, the synthetic lethality between BRCA1/2 and PARP1 inhibition has been clinically proven. Thus, both preclinical and clinical data showing a preferential anti-tumor effect on BRCA1/2 deficient tumors by a PARP1 inhibitor are the best examples of the synthetic lethal approach of cancer therapeutics. Finally, methodological progress regarding synthetic lethal screening, including barcode shRNA screening and in vivo synthetic lethal screening, is described. Given the fact that an increasing number of synthetic lethal genes for major cancerous genes have been validated in preclinical studies, this intriguing approach awaits clinical verification of preferential benefits for cancer patients with specific genetic alterations as a clear predictive factor for tumor response.

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Year:  2010        PMID: 20976469     DOI: 10.1007/s00439-010-0900-x

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  59 in total

1.  Kinase requirements in human cells: V. Synthetic lethal interactions between p53 and the protein kinases SGK2 and PAK3.

Authors:  Amy Baldwin; Dorre A Grueneberg; Karin Hellner; Jacqueline Sawyer; Miranda Grace; Wenliang Li; Ed Harlow; Karl Munger
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-28       Impact factor: 11.205

Review 2.  A lethal combination for cancer cells: synthetic lethality screenings for drug discovery.

Authors:  Elisa Ferrari; Chiara Lucca; Marco Foiani
Journal:  Eur J Cancer       Date:  2010-08-17       Impact factor: 9.162

Review 3.  The role of mammalian target of rapamycin inhibitors in the treatment of advanced renal cancer.

Authors:  Daniel Cho; Sabina Signoretti; Meredith Regan; James W Mier; Michael B Atkins
Journal:  Clin Cancer Res       Date:  2007-01-15       Impact factor: 12.531

4.  Gefitinib or chemotherapy for non-small-cell lung cancer with mutated EGFR.

Authors:  Makoto Maemondo; Akira Inoue; Kunihiko Kobayashi; Shunichi Sugawara; Satoshi Oizumi; Hiroshi Isobe; Akihiko Gemma; Masao Harada; Hirohisa Yoshizawa; Ichiro Kinoshita; Yuka Fujita; Shoji Okinaga; Haruto Hirano; Kozo Yoshimori; Toshiyuki Harada; Takashi Ogura; Masahiro Ando; Hitoshi Miyazawa; Tomoaki Tanaka; Yasuo Saijo; Koichi Hagiwara; Satoshi Morita; Toshihiro Nukiwa
Journal:  N Engl J Med       Date:  2010-06-24       Impact factor: 91.245

5.  Enhanced sensitivity of PTEN-deficient tumors to inhibition of FRAP/mTOR.

Authors:  M S Neshat; I K Mellinghoff; C Tran; B Stiles; G Thomas; R Petersen; P Frost; J J Gibbons; H Wu; C L Sawyers
Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-14       Impact factor: 11.205

6.  Use of isogenic human cancer cells for high-throughput screening and drug discovery.

Authors:  C J Torrance; V Agrawal; B Vogelstein; K W Kinzler
Journal:  Nat Biotechnol       Date:  2001-10       Impact factor: 54.908

7.  Discovery of a selective inhibitor of oncogenic B-Raf kinase with potent antimelanoma activity.

Authors:  James Tsai; John T Lee; Weiru Wang; Jiazhong Zhang; Hanna Cho; Shumeye Mamo; Ryan Bremer; Sam Gillette; Jun Kong; Nikolas K Haass; Katrin Sproesser; Ling Li; Keiran S M Smalley; Daniel Fong; Yong-Liang Zhu; Adhirai Marimuthu; Hoa Nguyen; Billy Lam; Jennifer Liu; Ivana Cheung; Julie Rice; Yoshihisa Suzuki; Catherine Luu; Calvin Settachatgul; Rafe Shellooe; John Cantwell; Sung-Hou Kim; Joseph Schlessinger; Kam Y J Zhang; Brian L West; Ben Powell; Gaston Habets; Chao Zhang; Prabha N Ibrahim; Peter Hirth; Dean R Artis; Meenhard Herlyn; Gideon Bollag
Journal:  Proc Natl Acad Sci U S A       Date:  2008-02-19       Impact factor: 11.205

Review 8.  RAS: target for cancer therapy.

Authors:  Nandita Saxena; Sitanshu Sekhar Lahiri; Shashank Hambarde; Rajendra Prasad Tripathi
Journal:  Cancer Invest       Date:  2008-11       Impact factor: 2.176

9.  Rapid creation and quantitative monitoring of high coverage shRNA libraries.

Authors:  Michael C Bassik; Robert Jan Lebbink; L Stirling Churchman; Nicholas T Ingolia; Weronika Patena; Emily M LeProust; Maya Schuldiner; Jonathan S Weissman; Michael T McManus
Journal:  Nat Methods       Date:  2009-05-17       Impact factor: 28.547

10.  Discovery of gene expression-based pharmacodynamic biomarker for a p53 context-specific anti-tumor drug Wee1 inhibitor.

Authors:  Shinji Mizuarai; Kazunori Yamanaka; Hiraku Itadani; Tsuyoshi Arai; Toshihide Nishibata; Hiroshi Hirai; Hidehito Kotani
Journal:  Mol Cancer       Date:  2009-06-08       Impact factor: 27.401

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  6 in total

Review 1.  Systems genetics in "-omics" era: current and future development.

Authors:  Hong Li
Journal:  Theory Biosci       Date:  2012-11-09       Impact factor: 1.919

2.  Development of small-molecule probes that selectively kill cells induced to express mutant RAS.

Authors:  Michel Weïwer; Joshua A Bittker; Timothy A Lewis; Kenichi Shimada; Wan Seok Yang; Lawrence MacPherson; Sivaraman Dandapani; Michelle Palmer; Brent R Stockwell; Stuart L Schreiber; Benito Munoz
Journal:  Bioorg Med Chem Lett       Date:  2011-09-28       Impact factor: 2.823

3.  Structural basis for allosteric PARP-1 retention on DNA breaks.

Authors:  Levani Zandarashvili; Marie-France Langelier; Uday Kiran Velagapudi; Mark A Hancock; Jamin D Steffen; Ramya Billur; Zain M Hannan; Andrew J Wicks; Dragomir B Krastev; Stephen J Pettitt; Christopher J Lord; Tanaji T Talele; John M Pascal; Ben E Black
Journal:  Science       Date:  2020-04-03       Impact factor: 47.728

4.  Identification of potential synthetic lethal genes to p53 using a computational biology approach.

Authors:  Xiaosheng Wang; Richard Simon
Journal:  BMC Med Genomics       Date:  2013-09-11       Impact factor: 3.063

Review 5.  DNA repair in cancer: emerging targets for personalized therapy.

Authors:  Rachel Abbotts; Nicola Thompson; Srinivasan Madhusudan
Journal:  Cancer Manag Res       Date:  2014-02-19       Impact factor: 3.989

6.  Synthetic lethality between gene defects affecting a single non-essential molecular pathway with reversible steps.

Authors:  Andrei Zinovyev; Inna Kuperstein; Emmanuel Barillot; Wolf-Dietrich Heyer
Journal:  PLoS Comput Biol       Date:  2013-04-04       Impact factor: 4.475

  6 in total

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