Literature DB >> 20975176

Uncertainty-aware guided volume segmentation.

Jörg-Stefan Prassni1, Timo Ropinski, Klaus Hinrichs.   

Abstract

Although direct volume rendering is established as a powerful tool for the visualization of volumetric data, efficient and reliable feature detection is still an open topic. Usually, a tradeoff between fast but imprecise classification schemes and accurate but time-consuming segmentation techniques has to be made. Furthermore, the issue of uncertainty introduced with the feature detection process is completely neglected by the majority of existing approaches.In this paper we propose a guided probabilistic volume segmentation approach that focuses on the minimization of uncertainty. In an iterative process, our system continuously assesses uncertainty of a random walker-based segmentation in order to detect regions with high ambiguity, to which the user's attention is directed to support the correction of potential misclassifications. This reduces the risk of critical segmentation errors and ensures that information about the segmentation's reliability is conveyed to the user in a dependable way. In order to improve the efficiency of the segmentation process, our technique does not only take into account the volume data to be segmented, but also enables the user to incorporate classification information. An interactive workflow has been achieved by implementing the presented system on the GPU using the OpenCL API. Our results obtained for several medical data sets of different modalities, including brain MRI and abdominal CT, demonstrate the reliability and efficiency of our approach.

Mesh:

Year:  2010        PMID: 20975176     DOI: 10.1109/TVCG.2010.208

Source DB:  PubMed          Journal:  IEEE Trans Vis Comput Graph        ISSN: 1077-2626            Impact factor:   4.579


  6 in total

1.  VIPAR, a quantitative approach to 3D histopathology applied to lymphatic malformations.

Authors:  René Hägerling; Dominik Drees; Aaron Scherzinger; Cathrin Dierkes; Silvia Martin-Almedina; Stefan Butz; Kristiana Gordon; Michael Schäfers; Klaus Hinrichs; Pia Ostergaard; Dietmar Vestweber; Tobias Goerge; Sahar Mansour; Xiaoyi Jiang; Peter S Mortimer; Friedemann Kiefer
Journal:  JCI Insight       Date:  2017-08-17

2.  Simulation based planning of surgical interventions in pediatric cardiology.

Authors:  Alison L Marsden
Journal:  Phys Fluids (1994)       Date:  2013-10-23       Impact factor: 3.521

3.  Multimodal Imaging of Patients With Gliomas Confirms 11C-MET PET as a Complementary Marker to MRI for Noninvasive Tumor Grading and Intraindividual Follow-Up After Therapy.

Authors:  Kai R Laukamp; Florian Lindemann; Matthias Weckesser; Volker Hesselmann; Sandra Ligges; Johannes Wölfer; Astrid Jeibmann; Bastian Zinnhardt; Thomas Viel; Michael Schäfers; Werner Paulus; Walter Stummer; Otmar Schober; Andreas H Jacobs
Journal:  Mol Imaging       Date:  2017-01-01       Impact factor: 4.488

4.  Aleatoric uncertainty estimation with test-time augmentation for medical image segmentation with convolutional neural networks.

Authors:  Guotai Wang; Wenqi Li; Michael Aertsen; Jan Deprest; Sébastien Ourselin; Tom Vercauteren
Journal:  Neurocomputing       Date:  2019-02-07       Impact factor: 5.719

5.  Rapid methods for the evaluation of fluorescent reporters in tissue clearing and the segmentation of large vascular structures.

Authors:  Nils Kirschnick; Dominik Drees; Esther Redder; Raghu Erapaneedi; Abel Pereira da Graca; Michael Schäfers; Xiaoyi Jiang; Friedemann Kiefer
Journal:  iScience       Date:  2021-05-26

6.  FISICO: Fast Image SegmentatIon COrrection.

Authors:  Waldo Valenzuela; Stephen J Ferguson; Dominika Ignasiak; Gaëlle Diserens; Levin Häni; Roland Wiest; Peter Vermathen; Chris Boesch; Mauricio Reyes
Journal:  PLoS One       Date:  2016-05-25       Impact factor: 3.240

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.